NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS48584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48584.1 Public Mus musculus 10 Mypn 23 108 98 CCDS HistoryNCBI Gene:68802Re-query CCDS DB by CCDS ID:48584.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48584.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095580.2 ENSMUSP00000093240.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095580.2Link to Ensembl Protein Viewer:ENSMUSP00000093240.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000095580Re-query CCDS DB by Protein ID:ENSMUSP00000093240
Original member Current member NCBI NM_182992.2 NP_892037.2 Accepted alive Link to Nucleotide Sequence:NM_182992.2Link to Protein Sequence:NP_892037.2Re-query CCDS DB by Nucleotide ID:NM_182992Re-query CCDS DB by Protein ID:NP_892037Link to BLAST:NP_892037.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_892037.2 1315 Q5DTJ9 1315 100% 0 0

Chromosomal Locations for CCDS 48584.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 63116857 63117026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63118421 63118554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63120029 63120194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63121902 63122109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63123271 63123397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63125669 63125748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63127628 63127777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63130983 63131204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63134933 63135071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63135708 63136295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63145836 63146208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63147877 63147993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63150023 63150046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63152795 63152936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63162222 63162293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63163513 63163624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63167233 63167284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63169255 63169430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 63192387 63193282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3948 nt):
ATGCAAGAAGACAGCATAGAGGCATCCACTTCCATCTCTCAACTCCTGAGAGAAAGTTACCTGGCTGAAA
CCAGACATCGTGGGGACAACGAGCGAAGTCGAGCTGAGCCCTCCTCCAACCCTTTCCATTTCAGTGGTCC
TGGGGCTGCAGAGGGAGGAGGCCCAGAGGACCTTCCGGACCTTTCTGCCTTCCTGAGCCAAGAGGAGTTA
GATGAAAGTGTCAATCTGGCGAGGCTGGCCATCAACCACGACCCCTTGGAGAGAGTGGATGAAGCTCAAG
CCAGGAAGCGTCTGTCTTCCGACCAGACGAAGCATGCATCCAAGCCAAGCTTCGAACCTGCCTTCCACCA
GGACAGCTCCCGAGGTCCGGCCAGTCCTAAAGACAGCCCGCCAGAGACCAAGAGGCCGCAGTACAGTTCT
GAAACCCAGTCCAAGAAAGTTTTCCTGAACAAGGCTGCCGATTTCATCGAAGAACTTTCCTCCCTTTTCA
AGGCTCACAGCTCCAAGAGGATCAGACCTCGGGCCTGCAAAAACCACAAGAGCAAGACGGAATCCCAAAA
CAAAGTTCTGCAGGAAAACAGCCCCACTTTCTCAGATCTAACAGAAAGGCGAGAGAGAGCATCGGTCCCC
ATTCCCATCCCTGCGGACAGCAGGGATAACGAGCTGAACCACGCTATTGAACAGCGAGAAGCCAAGAGGA
GGGAAGCCGAGTTGGCTGCGGGGGAGGCTGCGGCTGGAGACAGCACCCCTGGCTCTTCGCCTTCATCCCT
ATACTACGAAGAGCCTCTGGGGCAGCCTCCCCGCTTCACACAAAAGTTACGGAGCCGAGAAGTTCCGGAA
GGCAGCCGAGTCCAGTTGGATTGTATAGTGGTAGGAATTCCACCGCCCCAAGTAAGGTGGTATTGTGAAG
GCAAGGAGCTTGAAAACTCTCCAGATATCCACATTGTGCAGGCAGGAAACCTTCACTCACTGACCATCGC
CGAGGCCTTCGAAGAGGACACAGGACGATACTCATGCTTTGCTTCCAACATTTATGGGACAGATTCAACT
TCCGCTGAGATTTACATAGAAGGAGTCTCTTCCTCTGACTCAGAAGGGGACCCTAACAAAGAAGAGATGA
ATCGAATCCAGAAGCCAAATGAGGTGTCCTCACCTCCCACCACCTCTGCAGCCATTCCTCCAGCAGCAGA
AGCCCAGCCTTTGGCGGCCCAGCCCAGAGTGTCCACCGTCCAGCAGTGTCAGAGTCCTACCAACTATTTG
CAAGGCCTGAACGGGAAGCCCATCATTGCAGCGCCAGTGTTTACGAAGATGCTGCAGAACTTGTCAGCCT
CTGAGGGGCAGCTGGTTGTCTTTGAGTGCAGAGTGAAAGGGGCCCCATCTCCGAAAGTCGAGTGGTACAG
AGAAGGGACATTAATAGAAGACTCTCCCGACTTCAGGATCTTACAGAAGAAACCTCGATCCATGGCAGAA
CCAGAGGAGATCTGCACGTTAGTCATTGCTGAGGTGTTTTCGGAAGACTCGGGATGCTTCACGTGCACCG
CAAGCAACAAATATGGCACCGTGTCTAGCATCGCACAGTTAGACGTGAGAGGAAATGAAGACATCAGTGA
TAATGGAGCTCTTCACTCAGCAAATTCAACCACCAACCCGGCTGTGGCTGAGCACCAGCCTTCCCCACTC
AACCCACAGCCTCTTTCAGAGGAGCAGCCCCCAAAACCCAAACTTGAAGGGGTTCTGGTGAACCATAATG
AGCCCCGGTCCAGCTCCAGGATTGGGCTACGGGTGCACTTCAACCTACCGGAAGACGACAAAGATATGGA
GGCATCCTCTGGGAGCGGTGCGGCCAATACCAGCCAGACTAGACCGAATTCCTTCCCCGAGAGGTTCAAT
GGACAGGAAGCCAGAATCCCAGAGCCTTCCTCACCTATCAAGGAGCCCCCTCCGGTCCTGGCCAAACCCA
AACTTGACTCCACTCAGTTACAACAGCTTCATAACCAAGTGTTACTGGAACAGCAGCAACTGCAAAACAC
ATCTCCTTCATCACCCAAGGAGTCTCTTCACATGAGTGCCTTGAACTCGGCTCCCCCGGCAGTGACCATC
TCCAGCAAGCAGGTGAAGGGTCCTGCGCCTCAGATGTTCAACCTGGCCCGGCCGAAGCACTTCTTCCCCG
CTTCAAGCACTTCCACAGCAACCGTGTCCCCATCCAGCTCCCCGGTGTTCACCTTGAGCAATACTCCTCA
AACAATTCAGAGGACAGTCAGCAAAGAAAGCCTCTTAATGGCCCACCCCTCCACACAAGGCAGATCTCCT
GGCGGGCTCTCCATCCAAAATGAGCCAGCTCCTCCAAGCCCAGCAGAGCCAGCAGCGCCACCAACAGCCG
CCTATTCCATCCCTAGCGGAAACCAGTTTCAGCCTCACTGCGTATCCCCCACTCCTGTCTCCCCTACCGG
TCGGATTCAGAACCCGGTGGCTTTTCTTAGCTCTGTTCTGCCTTCTCTCCCTTCCATTCCACCCACCAAC
GCCATGGGGCTGCCTAAAAGCGCACCATCTGTACCATCCCAGGGTCTAATGAAGAAAACCACAAAGGCCC
CTCAGGCAGTGAGTGACGACTACATCCGAGAGACGAAGAACTCAGTGATTCTAGACTTGGGGAAGAAAGT
GAATTTCGGTGACGTCAGATCACACCAGCAGGAATATAAAATTTCCAGCTTTGAGCAGAGGCTGATGAAC
GAGATAGAGTTCCGCCTGGAGCGGACTCCTGTTGACGAATCTGATGACGAGATAGAACACGACGAAATCC
CCACGGGCAAGTGCATCGCGCCCATCTTTGACAAAAGGCTCAAGCACTTCCGGGTTACCGAAGGCTCACC
AGTCACCTTCACCTGCAAAATTGTTGGGATACCTGTTCCAAAGGTTTATTGGTTCAAAGACGGGAAGCAG
ATTTCTAAGAGAAATGAGCACTGTAAAATGAGGAGAGAAGGGGATGGGACCTGCTCACTACACATTGAGT
CCACCCACGGCGATGATGACGGCAACTACACCATCATGGCCGCCAACCCCCAGGGGAGAATCAGCTGTTC
TGGCCATTTGATGGTACAGGGTTTGCCCATTCGAAGCCGACTCAGCCCTGCTCTGTCTCACAGAGGAAGG
TCCAGAATGCAGGAAAGAGACAAAGAGCCGCTACAGGAACGCTTTTTCCGACCACATTTCCTGCAGGCCC
CTGGGGATATGGTGGCTCACGAGGGCCGCCTCTGTCGGCTGGACTGTAAGGTGAGTGGCTTACCACCCCC
GGAGCTGACATGGCTACTCAATGGGCAACCTGTGCTACCCGACGCCTCCCACAAGATGCTGGTCAGAGAG
ACGGGAGTCCACTCTCTGCTCATCGACCCGCTCACCCAACGAGACGCAGGGACCTACACGTGCGTGGCTA
CCAACAAAACCGGGCAGAATTCCTTTAGTCTGGAGCTCACTGTGGTAGCCAAAGAGGTAAAGAAGGCGCC
AGTGATCCTGGAGAAACTCCAGAACAGCGGCGTCCCTGAGGGCCACCCGGTGCGACTGGAGGGCCGGGTC
ATAGGCATGCCCCCGCCTGTGTTCTACTGGAAGAAAGACAACGAGACCATCCCGTTCACTAGAGAGAGGA
TCAGCATGCACCAGGATACAACAGGCTATGTCTGCCTCCTCATCCAGCCAGCCAAGAAGTCCGACGCTGG
GTGGTACACACTGTCAGCCAAGAACGAAGCCGGCATCGTATCGTGCACAGCTAGGTTGGATATATATGCT
CAGTGGCACCAGCAAATCCCAACACCCATATCTATCCGGCCCAGCGGCAGCCGCTACGGGTCTCTCACCA
GCAAAGGCCTCGACATCTTTTCTGCCTTCTCCTCCGTGGAAAGCACGATGCTGTATTCCTGTACTTCTCG
GAGTGTAGTGGAGAGCGATGAACTTTAA

Translation (1315 aa):
MQEDSIEASTSISQLLRESYLAETRHRGDNERSRAEPSSNPFHFSGPGAAEGGGPEDLPDLSAFLSQEEL
DESVNLARLAINHDPLERVDEAQARKRLSSDQTKHASKPSFEPAFHQDSSRGPASPKDSPPETKRPQYSS
ETQSKKVFLNKAADFIEELSSLFKAHSSKRIRPRACKNHKSKTESQNKVLQENSPTFSDLTERRERASVP
IPIPADSRDNELNHAIEQREAKRREAELAAGEAAAGDSTPGSSPSSLYYEEPLGQPPRFTQKLRSREVPE
GSRVQLDCIVVGIPPPQVRWYCEGKELENSPDIHIVQAGNLHSLTIAEAFEEDTGRYSCFASNIYGTDST
SAEIYIEGVSSSDSEGDPNKEEMNRIQKPNEVSSPPTTSAAIPPAAEAQPLAAQPRVSTVQQCQSPTNYL
QGLNGKPIIAAPVFTKMLQNLSASEGQLVVFECRVKGAPSPKVEWYREGTLIEDSPDFRILQKKPRSMAE
PEEICTLVIAEVFSEDSGCFTCTASNKYGTVSSIAQLDVRGNEDISDNGALHSANSTTNPAVAEHQPSPL
NPQPLSEEQPPKPKLEGVLVNHNEPRSSSRIGLRVHFNLPEDDKDMEASSGSGAANTSQTRPNSFPERFN
GQEARIPEPSSPIKEPPPVLAKPKLDSTQLQQLHNQVLLEQQQLQNTSPSSPKESLHMSALNSAPPAVTI
SSKQVKGPAPQMFNLARPKHFFPASSTSTATVSPSSSPVFTLSNTPQTIQRTVSKESLLMAHPSTQGRSP
GGLSIQNEPAPPSPAEPAAPPTAAYSIPSGNQFQPHCVSPTPVSPTGRIQNPVAFLSSVLPSLPSIPPTN
AMGLPKSAPSVPSQGLMKKTTKAPQAVSDDYIRETKNSVILDLGKKVNFGDVRSHQQEYKISSFEQRLMN
EIEFRLERTPVDESDDEIEHDEIPTGKCIAPIFDKRLKHFRVTEGSPVTFTCKIVGIPVPKVYWFKDGKQ
ISKRNEHCKMRREGDGTCSLHIESTHGDDDGNYTIMAANPQGRISCSGHLMVQGLPIRSRLSPALSHRGR
SRMQERDKEPLQERFFRPHFLQAPGDMVAHEGRLCRLDCKVSGLPPPELTWLLNGQPVLPDASHKMLVRE
TGVHSLLIDPLTQRDAGTYTCVATNKTGQNSFSLELTVVAKEVKKAPVILEKLQNSGVPEGHPVRLEGRV
IGMPPPVFYWKKDNETIPFTRERISMHQDTTGYVCLLIQPAKKSDAGWYTLSAKNEAGIVSCTARLDIYA
QWHQQIPTPISIRPSGSRYGSLTSKGLDIFSAFSSVESTMLYSCTSRSVVESDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH