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Report for CCDS19164.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19164.1 Public Mus musculus 5 Tmem214 23 108 98 CCDS HistoryNCBI Gene:68796Re-query CCDS DB by CCDS ID:19164.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19164.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000201203.3 ENSMUSP00000144615.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000201203.3Link to Ensembl Protein Viewer:ENSMUSP00000144615.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000201203Re-query CCDS DB by Protein ID:ENSMUSP00000144615
Original member Current member NCBI NM_144525.4 NP_653108.2 Accepted alive Link to Nucleotide Sequence:NM_144525.4Link to Protein Sequence:NP_653108.2Re-query CCDS DB by Nucleotide ID:NM_144525Re-query CCDS DB by Protein ID:NP_653108Link to BLAST:NP_653108.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653108.2 687 Q8BM55-1 687 100% 0 0

Chromosomal Locations for CCDS 19164.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 30869668 30869818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30870589 30870788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30871420 30871570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30871721 30871855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30872072 30872154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30872501 30872606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30872687 30872768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30873043 30873144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30873495 30873636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30873956 30874047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30874313 30874361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30874537 30874650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30874851 30874968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30875790 30875886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30876047 30876215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30876363 30876508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 30876664 30876790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2064 nt):
ATGGCGGCCAGATCAGCGGGTAGCGGTGGCTGGGAGGTGGTGAAGAGGGGCCGGCGACCTGGAGCAAGCA
GCGGTGGGCGAGGCGGCGGCGGTGGCAGTGACCGCCGGGCGCTCGGGGAGGCAAATGGAGTGTTGAAATA
CGACCTGAGCTCACCAATCCAGACTACAAGCACTCTTTATGAGCGTGGCTTTGAGAAAATCATGAAACGG
CAGAATAAAGAGCAAGTTCCACCCCCTGCTGCAGAGTCTAAGAAACCGATAAACAAGAAGCAACCAAAGA
AGGTGACAGCTGTTCCTAGCCAAAACCAGAAACAGGGCCCATTCCGACGCCTGGAGGACGCACTGAAAGC
GCTGGATGTGGCAGCTCTGCAGAAGGAACTGGACAAGAGCCAGAGCGTGTTCACTGGGAACCCCTCCGTG
TGGCTGAAGGACCTGGCCAGCTATCTCAACTACAAGCTCCAGACTCCACGGATGGAGCCCACTCTGAGCC
AGTATCCACATGATTATCCCTACAGCCTTGTGAGCCGAGAGCTACGTGGGATCATCCGGGGGCTCCTGAC
CAAAGCTGCAGGGTCTGTGGAGCTCTTTTTTGACCACTGTCTATTCACCATGCTGCAAGAGCTGGATAAA
ACACCAGGGGAGTCGCTACATGGGTACCGCATCTGTATTCAAGCCGTTCTGCAAGACAAGCCTAAGATTG
TCACCTCAAACCTGGACAAGTTCCTAGAGCTTCTGCGGTCCCACCAGAGCCGACCAGCAAAGTGCCTGAC
CATCATGTGGGCCCTGGGGCAAGCGGGTTTCACCAACCTCACTGAGGGACTGAAAGTGTGGCTGGGGATC
ATGCTGCCTGTGCTGGGCATCAAGGCTCTGTCTCCCTTTGCCATCGCATACCTGGACCGGCTGCTCCTGA
TGCATCCCAACCTCACCAAAGGCTTTGGCATGATTGGCCCCAAGGACTTCTTCCCCCTTCTGGACTTTGC
CTATATGCCCAACAATTCCCTGAGCCCCAGCCTGCAGGAGCAGCTGTGCCAGCTCTTCCCCCGATTGAAG
GTGCTGGCATTTGGGGCCAAGCCGGAATCTTCCCTGCACACCTACTTCCCGTCATTCCTGTCCAGAGCCA
CCCCTAGCTGTCCTGCTGCCATGAAGAAAGAGCTCCTGGCCAGCCTGACCCAGTGCCTGACTGTGGACCC
CCTTAGCACTAGTGTCTGGAGACAGCTGTACCCCAAGCATCTGTCACAGTCCAGCCTGCTGCTGGAGCAC
CTACTCAAGTCCTGGGAGCACATCCCCAAGAAGGCACGGAAATCTTTACAAGAAACCATCCAGTCCTTGA
AGGTTACCAACCAGGAGCTTCTGAAGAAGGGCAGTGGTGGCAGTGAGCATGTTCTCACCTGTGACACAGC
CTGCAAGGGCTTGTTGCAACGGGCACGGGGTCCTCGGCCACCCTGGGCCCGGCTATTCCTGCTGCTTCTG
GTCTTTGCAGTAGGATTCCTATGTCATGACTTGCGGTCAAACAGCTCTTTGCAGGCCTCCCTCACTGGCC
GGCTGCTTCGATCCTCCGGTCTCTTGCCTGTTGGCCAGCAAGTGTGTGCGAGACTCTCCTCCTACAGCCT
GCAGAGCTACAACTGGCTGCAGGAGACCTTGCCAGCCTGTGGCTCCCACCTGCTTGCTGTGGTACAGCCC
AGTCTGCAGCTGGCCTGGACACACATCTATGCCATATTCAGCTTCCTTTCTGCCCACTGTGCCTCCTACC
TTGCCTGCTTCAGTGATAGCCTGGCTGGCTTCTTTCAGAGGGTCCAGCTCCCTGAGGCCCTGCAGCAGCT
CTTCCACGCCTTGAAGGAACTGCTGCTGCTCTTCTGCCATAGCGTGCTGCTGCCCACATGGCACTTGCTG
CTTGCAGCCCTGGCCCAAGTCCAGGAGCATTGCCATGAGGCCTGCAGAGGGGACGTGACCTGGGACTGCA
TTAAGACACAGTTGAGCAGAGCTGCCCAATGGACCTGGCTCTGCCTGCAGGATGTCACAGTGGCTTTCTT
GGACTGGGCACTCACCATGATATCCCAGCAATAG

Translation (687 aa):
MAARSAGSGGWEVVKRGRRPGASSGGRGGGGGSDRRALGEANGVLKYDLSSPIQTTSTLYERGFEKIMKR
QNKEQVPPPAAESKKPINKKQPKKVTAVPSQNQKQGPFRRLEDALKALDVAALQKELDKSQSVFTGNPSV
WLKDLASYLNYKLQTPRMEPTLSQYPHDYPYSLVSRELRGIIRGLLTKAAGSVELFFDHCLFTMLQELDK
TPGESLHGYRICIQAVLQDKPKIVTSNLDKFLELLRSHQSRPAKCLTIMWALGQAGFTNLTEGLKVWLGI
MLPVLGIKALSPFAIAYLDRLLLMHPNLTKGFGMIGPKDFFPLLDFAYMPNNSLSPSLQEQLCQLFPRLK
VLAFGAKPESSLHTYFPSFLSRATPSCPAAMKKELLASLTQCLTVDPLSTSVWRQLYPKHLSQSSLLLEH
LLKSWEHIPKKARKSLQETIQSLKVTNQELLKKGSGGSEHVLTCDTACKGLLQRARGPRPPWARLFLLLL
VFAVGFLCHDLRSNSSLQASLTGRLLRSSGLLPVGQQVCARLSSYSLQSYNWLQETLPACGSHLLAVVQP
SLQLAWTHIYAIFSFLSAHCASYLACFSDSLAGFFQRVQLPEALQQLFHALKELLLLFCHSVLLPTWHLL
LAALAQVQEHCHEACRGDVTWDCIKTQLSRAAQWTWLCLQDVTVAFLDWALTMISQQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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