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Report for CCDS26067.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26067.1 Public Mus musculus 12 Angel1 23 108 98 CCDS HistoryNCBI Gene:68737Re-query CCDS DB by CCDS ID:26067.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26067.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021682.8 ENSMUSP00000021682.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021682.8Link to Ensembl Protein Viewer:ENSMUSP00000021682.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000021682Re-query CCDS DB by Protein ID:ENSMUSP00000021682
Original member Current member NCBI NM_144524.2 NP_653107.2 Accepted alive Link to Nucleotide Sequence:NM_144524.2Link to Protein Sequence:NP_653107.2Re-query CCDS DB by Nucleotide ID:NM_144524Re-query CCDS DB by Protein ID:NP_653107Link to BLAST:NP_653107.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653107.2 667 Q8VCU0 667 100% 0 0

Chromosomal Locations for CCDS 26067.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 86702281 86702441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 86703157 86703320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 86705267 86705336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 86716916 86717026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 86717715 86717841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 86720230 86720663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 86721311 86721380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 86721841 86722067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 86722845 86723420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 86726330 86726393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2004 nt):
ATGATCGCGTCGTGCCTGTATTACCTGCTGCTGCCAGCCGCGCGCCTCTTCCGCTTTCTCTCAGATGCTT
TCTTTACATGTCGAAAAAATGCCCTTCTGGCGAAGAGCTCATCTCCCCAGGTAGAGGGTAACTTTGCCAT
GGCCCCTCGGGGGCCTGACCAAGAAGAGTGTGAGGGCCTGCTGCAGCAGTGGCGAGAAGAAGGGTGGAAC
CAGACACCCTCAACTGCAAGCGAGGGTCCCCTTGCGGATAAGGGACTAGCTGAGAGCAGTCTGGCCCTCC
TGATGGATAATTCTGGAGAACAGGATGCTGCCTCGGAGGACAAGTGGTCCAGCAGGCAGCTGAGTGACCT
TCGGGCAGCAGAGAACCTGAACCAGCCTTTCCCTGAGGTGCTAGGGGAGGAGCCTCTGGCCGAGGTTGAG
GGTCCTTTGTGGGCGGCTGTTCCGGTACAGACAGGGCCCCAGTATGCAGATTGTGCTGTTCTTCCAATGG
GTGCGATGGCCGCAGAACAGTGGGAAGAGGACCCTGCAATGGTGGCCTGGAGCATAGCACCGGAGCCTAT
GCCCCAGGAGGAGACTTCCATGTGGCCCTTTGAAGGCCTGGAACAGCTGCAGCCTCCCCCAATGGAAATA
CCTTATCATGAAATCCTGTGGCGAGAATGGGAGGATTTCTCCACACAGCCAGATGCTCAGGGTCTGGAGG
CAGGAGACGGCCCTCAGTTCCAGTTCACTCTGATGTCGTATAATATCCTGGCCCAGGACCTGATGCAGCA
GAGCTCAGAGCTCTATCTGCATTGCCATCCAGACATCCTCAACTGGAATTACCGCTTTGCCAACCTCATG
CAGGAATTCCAGCACTGGGACCCGGATATCCTGTGTCTTCAGGAAGTCCAGGAAGACCACTACTGGGAGC
AGCTGGAGCCCTCTCTGCGGATGATGGGCTTCACCTGTTTTTACAAGAGGAGGACTGGGTGTAAAACGGA
TGGCTGTGCTGTGTGCTACAAGCCCACCAGGTTCCGTCTGCTCTGTGCCAGCCCTGTGGAGTACTTCCGG
CCTGGGTTGGAGCTCCTCAACCGGGACAATGTGGGCTTAGTGTTGCTGCTGCAGCCGCTAGTGCCAGAAG
GTCTGGGGCAAGTCTCAGTGGCTCCCCTGTGTGTGGCAAATACCCATGTCCTGTACAACCCGCGTCGGGG
TGATGTCAAGCTGGCCCAGATGGCCATTCTTCTGGCCGAGGTGGACAAGGTGGCCAGGTTGTCAGATGGC
AGCCACTGCCCCATCATCTTGTGTGGGGACCTGAATTCTGTCCCTGACTCACCTCTCTACAACTTCATCA
GGGATGGAGAGCTCCAGTACAATGGCATGCCAGCCTGGAAGGTTTCTGGACAGGAAGACTTCTCTCATCA
GCTTTACCAGAGGAAGCTGCAGGCCCCACTGTGGCCCAGCTCCCTGGGCATCACTGACTGCTGTCAATAT
GTCACCTCCTGTCATCCCAAGAGATCAGAGAGACTGAAATATGGCCGAGACTTCCTACTACGATTCCGCT
TCTGTGACCTCGCTTGCCAGCGACCAGTGGGACTGGTTCTAATGGAAGGAGTGACAGACACTAAGCCAGA
TCGACCTGCTGGTTGGGCCGAGTGTATCTTTGAGGAAGAGATATCTGAACTTGAGCCTGTCTTCCCCAGG
ACTATAGGCACCATCCAGCACTGCCTCCACCTGACCTCAGTGTATACCCACTTCCTGCCCCAGCATGGCT
GCCCAGAGGTCACCACGATGCCCTTAGGGCTTGGGATGACAGTGGATTACATTTTCTTCTCAGCTGAATC
CTGTGAGAATGAGAACAGAACCGATCACAGACTGGATCGAGATGGAACTCTCAAGCTCCTGGGCCGCCTC
TCCCTCCTCTCTGAAGAGATTCTCTGGGCTGCCAATGGCTTACCCAACCCCTTCTACTCTTCAGACCATC
TCTGCTTGCTTGCCAGCTTCGGCATGGAAGTCACTGCCCCATGA

Translation (667 aa):
MIASCLYYLLLPAARLFRFLSDAFFTCRKNALLAKSSSPQVEGNFAMAPRGPDQEECEGLLQQWREEGWN
QTPSTASEGPLADKGLAESSLALLMDNSGEQDAASEDKWSSRQLSDLRAAENLNQPFPEVLGEEPLAEVE
GPLWAAVPVQTGPQYADCAVLPMGAMAAEQWEEDPAMVAWSIAPEPMPQEETSMWPFEGLEQLQPPPMEI
PYHEILWREWEDFSTQPDAQGLEAGDGPQFQFTLMSYNILAQDLMQQSSELYLHCHPDILNWNYRFANLM
QEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFR
PGLELLNRDNVGLVLLLQPLVPEGLGQVSVAPLCVANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSDG
SHCPIILCGDLNSVPDSPLYNFIRDGELQYNGMPAWKVSGQEDFSHQLYQRKLQAPLWPSSLGITDCCQY
VTSCHPKRSERLKYGRDFLLRFRFCDLACQRPVGLVLMEGVTDTKPDRPAGWAECIFEEEISELEPVFPR
TIGTIQHCLHLTSVYTHFLPQHGCPEVTTMPLGLGMTVDYIFFSAESCENENRTDHRLDRDGTLKLLGRL
SLLSEEILWAANGLPNPFYSSDHLCLLASFGMEVTAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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