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Report for CCDS19248.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19248.1 Public Mus musculus 5 Evc2 23 108 98 CCDS HistoryNCBI Gene:68525Re-query CCDS DB by CCDS ID:19248.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19248.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056365.8 ENSMUSP00000055130.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056365.8Link to Ensembl Protein Viewer:ENSMUSP00000055130.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000056365Re-query CCDS DB by Protein ID:ENSMUSP00000055130
Original member Current member NCBI NM_145920.3 NP_666032.1 Accepted alive Link to Nucleotide Sequence:NM_145920.3Link to Protein Sequence:NP_666032.1Re-query CCDS DB by Nucleotide ID:NM_145920Re-query CCDS DB by Protein ID:NP_666032Link to BLAST:NP_666032.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666032.1 1220 Q8K1G2 1220 100% 0 0

Chromosomal Locations for CCDS 19248.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 37338548 37338727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37347440 37347508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37348588 37348774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37350339 37350448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37351121 37351174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37357400 37357534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37363517 37363656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37370524 37370848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37378183 37378422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37380410 37380585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37383078 37383237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37386685 37387139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37391993 37392197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37393080 37393196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37410234 37410461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37415727 37415947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37417405 37417492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37419124 37419326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37421838 37421939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 37424409 37424676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3663 nt):
ATGGGGGCGACGGGCCCCACGGGCGCTGGGGGACGAGCCACGTGGGTGCTGGCTGGGAATATCCTGGCCG
CTGCCCTGGTACTGGGCTCGGGTCCGCGTGCACTTCCACCATCCTTCCCTGCCCTGGGCCCAGGGTCACC
ATCTCGGCCCGGCCCAGCAGGACCCTGGGCAAGCTCGCAGTACAGCGATATTTCAAGAGAAGCCCGAGGT
CCCTTTGAGAATGGAGTGATATTTCAAAAATGCTCACTGGTGTCTGGGCAGAGCGAATCGCAGACCATGC
ACGTGCAGCTGTCCGTGAACAACACCAGGACGCCCACATCAGTCAACCTTTCGAACCTGCTCGTGCTAGA
TGAGATCACTGGCCTTGCTGTGAAGGAGTCGCCTGGAAATAATACTCAGGATGGAATCCAGACTTTCAGA
AAGAGCTTTCTGCAAGTGGGAGAATGCTACTCTGTCAGCTACACAGCCTCGCTGGACCCCACAGCCCTTG
GGACTGGGGAGAGCCTGGATCTTCCTGCCCGGCTCATCTTTCAGAGCCCCTCACAGAACAGAACTCAGCT
AAAAGCCCCCTTTACCATCACAGTGGAAGAAAAGATAATGGTTCTTCCTAACCATGGTCTTCACGCAGCA
GGCTTCATCGCAGCCTTCCTCATCTCCCTCCTCCTGACCGTGGCAGCCCTGTTCTTCTTGGCGAGGGGTC
GATGTCTGCAGGGAGGCATGCTGTCCAGATGCCGGATTCAGCATCCTGAGAACAAGCTGGAGCCCTCGCC
CTTCACCTCTGCTAACGGTGTGAGCCAGGACCTTTCCCTCAATGACCAAGTGGTTGCCATCCTGACTTCT
GAGGAGCCTGGGAGCATGCTTCAAGCCCTAGAAGAGTTGGAGATCGCAACCCTGAATCAGGCAGATGCGG
ATCTGGAGGCTTGTCGAAACCAGATTAGTAAGGACATCATTGCCCTTTTGATGAAGAATCTGGTCAGCGG
TGGTCACCTCTCTCCGCAAACAGAAAGGAAGATGGCCGCTGCTTTCAAAAAGCAGTTTCTGCTGTTGGAA
AATGAAATACAGGAGGAGTATGAGCGGAAGATGTTGGCACTGACGGCAGAGTGTGACCTAGAGATGAGGA
AGAAGACAGAAAACCAGTACCAGAGGGAGATGGTGGCCATGGAGGAAGCAGAAGAGGTGTTGAAGAGAGT
TAGCGAGAGGTCTGCTGCCGAGTGCAGCAGCCTTTTGCGGACCCTCCATGGGCTGGAGCAGGAGGACATG
CAGAGGTCCCTTACTCTGGACCAAGCCGAGGACTTTGCTCAAGCACACAGGCAGCTGGCTGTTTTCCAGA
GGAATGAATTACACAGCATCGTCTATACCCAGATACAGAGTGCTGTCTCCAAAGGGGAACTGAGGCCTGA
GGTGGCTAAAATGATGCTGCAAGACTACTCTAAAACACAGGAGAGTGTAGAAGAGCTGATGGACTTCTTC
CAGGCCACCAAGCGATACCATCTCAGCAAGAGGTTTGGCCACAGAGAGTACCTGGTCCAGAGACTGCAGG
CCATGGAGACCCGGGTGCAAGGGCTGCTGAACACCGCGGCTACCCAGCTAACAAGCCTCATCCATAAACA
TGAGAGGGCTGGCTACTTGGATGAAGATCAGATGGAAACGCTATTGGAGCGTGCACAGACAGAAACCTTT
TCTATAAAACAGAAGCTGGACAATGACTTAAAGCAGGAAAAGAAAAGGCTCCACCAGAGATTAATAACCA
GGAGGCGGCGAGAGCTTCTGCAGAAGCACAAGGAGCAGCAGAAGGAGCAGGTGTCCCTTGGCGAGGCCTC
CAGCACCGCGGAGGACGCAGTCCAGTACCTGCACCAGTGGAGGAGCGTGATGGCCGAGCACACCGCTGCC
CTGGAGGAGCTGCAGGAACGTCTGGACCAGGCTGCCCTGGATGACCTCCGGGTCCTGACTGTGTCGCTGT
CGGAGAAAGCCACGGAAGAGCTGAGGCGCCTGCAGAGCACGGCCATGACACAGGAGCTGCTGAAGCGCAG
TGCTCCCTGGCTCTTCCTGCAGCAGATCTTAGAGGAGCACAGCCGGGAGTCTGCGGCTCGCACCACGCAA
CTGGAGGCAGAGGAGAGGGAACGTGGCCAGGAGCTGGTGCAGGGCGTGAGGCAGAGGCTACAGCAGGATG
CACTGGAGGCCTACACGGAAGAGCAGGCAGAGCTGAGGCACTGGGAGCACTTGGTGTTCATGAAACTCTG
CTGTGCGGCCATCTCATTGTCTGAAGAAGACCTGCTCCGGGTAAGGCAGGAGGCACAGGGCTGCTTCAGC
CAGCTGGACCGGAGCTTGGCCCTCCCCAGAGTCCGTGCACGAGTGTTGCAGCAGCAGGCGCAGATGGCCT
GGCGGGAAGCAGAGTTTCGGAAACTGGACCAGGCCCTGGCTGCGCCTGAGCTGCAGTCCAAGGCAAGAAA
GCTGCGTTCCAAGGGCAGAGGCAAGGCCGATCTTCTGAAGAAGAACCTGGAGGATAAGATCCGACTATTC
GAGGAGCGGGCCCCTGTAGAACTGGCTGACCAGGTGCGAGGGGAATTGCTCCAAGAGAGGGTCCAGAGGC
TGGAGGCCCAGGAGGCGCACTTTGCTGAGTCACTTGTGGCTCTGCAGTTCCAGAAGGTGGCCCGGGCTGC
TGAGACCCTCTCAGTCTACACCGCCCTGCTCAGCATTCAAGACCTGCTGCTGGGGGAGCTGAGTGAGTCG
GAGACCCTGACCAAGTCAGCCTGTGTGCAGATCCTGGAGTCCCACAGGCCGGAGCTGCAGGAGCTGCAGG
AGCTGGAGAGGAAGCTGGAGGACCAGCTGGTGCAGCAGGAAGAGGCCGAGCAGCAGCGGGTCCTGGAGAG
CTGGCAGCGGTGGGCGGCCGATGGACCTGGGCTGAGCGAACCTGAGGAGATGGATCCTGAAAGGCAGGTC
TCTGCCATCCTGCGGCAAGCCCTGAACAAGGGCCAGAAGCTGCTGGAGCAGCATCAGCAGAGGGTGAGAG
AGGAGTGGCAGAACGGTGCGGTGCTGGAAGATTCTCTGGAAAGCATTGAAGCTGACACCATGGCCAGCCT
TTGCAGCCAGGGACTGAGGCTGGTGTCATACCTCTCAAGGATGACAATGGTACCAGGCAGCACACTACTG
CGACTCCTGAGTGTGGTGCTTCCAGCGGCTTCACAGCCTCAGCTACTGGCCCTGCTGGACGCAGTCAGTG
AGAAGCACTCCGACCACACAGCTGAGAATGAGAGCAGTGGTGAGCAGGCTCAGGCAGAGCAGAGCAAGAG
GAGGAAACACCAAGTTTGGTGGAAGGTTTTGGACAGCAGATTCAGAGCAGATCTGGTGAGTCAAGGACTG
GAGAGGATGCTCTGGGCCCGCCAGAAGAAGGAGCGCATATTGAAGAAGATATATGTTCCCGTCCAGGAGA
GGGTGATGTTTCCTGGGAAAGGAAGCTGGCCACACCTGTCCCTAGAACCCATTGGAGAACTGGCTCCCAT
CCCCATCACTGGGGCAGACGCTATGGACATATTAAACACGGGAGAAAAGATCTTTGTATTCAGAAGCCCA
AGGGAGCCCGAGATCTCTTTGCGTGTTCCTCCCAGGAGGAAAAAGAATTTCCTGAATGCCAAGAAGGCCA
ACAGGGCCTTGGGCTTGGACTGA

Translation (1220 aa):
MGATGPTGAGGRATWVLAGNILAAALVLGSGPRALPPSFPALGPGSPSRPGPAGPWASSQYSDISREARG
PFENGVIFQKCSLVSGQSESQTMHVQLSVNNTRTPTSVNLSNLLVLDEITGLAVKESPGNNTQDGIQTFR
KSFLQVGECYSVSYTASLDPTALGTGESLDLPARLIFQSPSQNRTQLKAPFTITVEEKIMVLPNHGLHAA
GFIAAFLISLLLTVAALFFLARGRCLQGGMLSRCRIQHPENKLEPSPFTSANGVSQDLSLNDQVVAILTS
EEPGSMLQALEELEIATLNQADADLEACRNQISKDIIALLMKNLVSGGHLSPQTERKMAAAFKKQFLLLE
NEIQEEYERKMLALTAECDLEMRKKTENQYQREMVAMEEAEEVLKRVSERSAAECSSLLRTLHGLEQEDM
QRSLTLDQAEDFAQAHRQLAVFQRNELHSIVYTQIQSAVSKGELRPEVAKMMLQDYSKTQESVEELMDFF
QATKRYHLSKRFGHREYLVQRLQAMETRVQGLLNTAATQLTSLIHKHERAGYLDEDQMETLLERAQTETF
SIKQKLDNDLKQEKKRLHQRLITRRRRELLQKHKEQQKEQVSLGEASSTAEDAVQYLHQWRSVMAEHTAA
LEELQERLDQAALDDLRVLTVSLSEKATEELRRLQSTAMTQELLKRSAPWLFLQQILEEHSRESAARTTQ
LEAEERERGQELVQGVRQRLQQDALEAYTEEQAELRHWEHLVFMKLCCAAISLSEEDLLRVRQEAQGCFS
QLDRSLALPRVRARVLQQQAQMAWREAEFRKLDQALAAPELQSKARKLRSKGRGKADLLKKNLEDKIRLF
EERAPVELADQVRGELLQERVQRLEAQEAHFAESLVALQFQKVARAAETLSVYTALLSIQDLLLGELSES
ETLTKSACVQILESHRPELQELQELERKLEDQLVQQEEAEQQRVLESWQRWAADGPGLSEPEEMDPERQV
SAILRQALNKGQKLLEQHQQRVREEWQNGAVLEDSLESIEADTMASLCSQGLRLVSYLSRMTMVPGSTLL
RLLSVVLPAASQPQLLALLDAVSEKHSDHTAENESSGEQAQAEQSKRRKHQVWWKVLDSRFRADLVSQGL
ERMLWARQKKERILKKIYVPVQERVMFPGKGSWPHLSLEPIGELAPIPITGADAMDILNTGEKIFVFRSP
REPEISLRVPPRRKKNFLNAKKANRALGLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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