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Report for CCDS26715.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26715.1 Public Mus musculus 13 Tmem174 23 108 98 CCDS HistoryNCBI Gene:68344Re-query CCDS DB by CCDS ID:26715.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26715.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050389.4 ENSMUSP00000057581.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050389.4Link to Ensembl Protein Viewer:ENSMUSP00000057581.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000050389Re-query CCDS DB by Protein ID:ENSMUSP00000057581
Original member Current member NCBI NM_026685.2 NP_080961.1 Accepted alive Link to Nucleotide Sequence:NM_026685.2Link to Protein Sequence:NP_080961.1Re-query CCDS DB by Nucleotide ID:NM_026685Re-query CCDS DB by Protein ID:NP_080961Link to BLAST:NP_080961.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080961.1 243 Q9DCX7 243 100% 0 0

Chromosomal Locations for CCDS 26715.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 98636408 98636513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98636695 98637320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (732 nt):
ATGGAGCACAGCAGTAATCGCCCAGAGGACTTCCCGCTTAACGTGTTCTCTGTCACTCCGTACACACCCA
GTACCGCCGACATCCAGGTGTCCGACGACGACAAGGCAGGGGCCACTTTGCTTTTCTCAGGCATCTTTCT
AGGACTGGTGGGGATCACTTTCACTGTCATGGGCTGGATCAAATACCAAGGTGTCTCCCACTTTGAATGG
ACCCAGCTCCTCGGACCCATCCTTCTGTCGGTCGGAGTGACATTCATCCTGATCGCTGTGTGCAAATTCA
AAATGCTATCCTGCCAGTTGTGCTCAGATAACGAGGAGAGGGTCCCGGACTCGGACCAGACTTCCGGAGG
ACAGTCGTTCGTTTTCACTGGCATCAATCAGCCCATCACCTTCCACGGGGCCACCGTGGTGCAGTATATC
CCTCCTCCTTACGGTTCTCAGGAGCCCCTGGGAATGAACGCCACCTACCTGCAACCCATGATGAATCCTT
GCGGTCTCATACCTCCTAGCGGAGCAGCGGCTGCCGCACCAAGTCCCCCTCAGTACTACACCATCTACCC
TCAAGACAATGCTGCGTTCGTGGAGAGTGAGGGCTTCTCTCCTTTCGTGGGCACTGGATATGACAGGCCC
GACTCTGATGCTGACCAGCTAGAAGGGACGGAGTTGGAAGAGGAGGACTGCGTATGTTTCTCTCCTCCAC
CGTATGAGGAGATATACGCTCTACCTCGCTAG

Translation (243 aa):
MEHSSNRPEDFPLNVFSVTPYTPSTADIQVSDDDKAGATLLFSGIFLGLVGITFTVMGWIKYQGVSHFEW
TQLLGPILLSVGVTFILIAVCKFKMLSCQLCSDNEERVPDSDQTSGGQSFVFTGINQPITFHGATVVQYI
PPPYGSQEPLGMNATYLQPMMNPCGLIPPSGAAAAAPSPPQYYTIYPQDNAAFVESEGFSPFVGTGYDRP
DSDADQLEGTELEEEDCVCFSPPPYEEIYALPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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