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Report for CCDS48266.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48266.1 Public Mus musculus 1 Maip1 23 108 98 CCDS HistoryNCBI Gene:68115Re-query CCDS DB by CCDS ID:48266.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48266.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027114.5 ENSMUSP00000027114.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027114.5Link to Ensembl Protein Viewer:ENSMUSP00000027114.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000027114Re-query CCDS DB by Protein ID:ENSMUSP00000027114
Original member Current member NCBI NM_001081181.3 NP_001074650.1 Accepted alive Link to Nucleotide Sequence:NM_001081181.3Link to Protein Sequence:NP_001074650.1Re-query CCDS DB by Nucleotide ID:NM_001081181Re-query CCDS DB by Protein ID:NP_001074650Link to BLAST:NP_001074650.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074650.1 291 Q8BHE8 291 100% 0 0

Chromosomal Locations for CCDS 48266.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 57406773 57407222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57409912 57409983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57411723 57411849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57413240 57413387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 57415656 57415734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGGCGCTGGCCGCCCGTCTCCTACCTCTGCCCCTGCTTTCCCGGCCGCTGCCCGGCCCGGTCACCCGAC
TCCGGACTCTCGGTAGCACCGAGGTGAGGCTGACGCTGACTGAAATTTGCTGCCTGTGCCGCCGTCGCCT
GGGCTCAAGCGCGGCTCCGATCCCTCGCTACACTCGGGCCTGGACAAGCCCTGCGTTGCGTTCCTGGAGC
TCCCGAAGATCCCTTCTCGGCCGGGTAGAACATCCTCCAGCCCTCGCTTCTTTACCCGCTAGTCCCAGCC
GCAGCTACAGCACCGAGGAGCAGCCCCAGCAACGCCAGAGAACCAGAATGATCATTCTGGGATTTTCCAA
TCCCATCAACTGGGTCCGGACTCGAATTTACGCCTTCCTTATTTGGGCCTATTTCGACAAAGAGTTCAGT
ATCGCTGAGTTCTCTGAAGGGGCGAAGCAGGCTTTTGCTTATGTATCCAAGTTGCTGTCACAGTGTAAAT
TTGATCTATTGGAAGAACTTGTAGCCAAAGAGGTGCTACAGATATTAAAAGAAAAAGTTACTTCATTGTC
TGATAACCATAAGAATGCACTTGCTGCAGACATAGATGACATTGTCTACACATCAACAGGCGATATCTCC
ATTTACTATGATGAGAAAGGAAGGAAGTTTGTGAACATCCTGATGTGCTTTTGGTATCTGACTAGTGCCA
ACATCCCCAGTGAGTCTTTAAGTGGAGCCAATGTGTTCCAGGTGAAGCTGGGGGATCAGAGTGTGGAAAC
TAAACAGCTGCTCAGTGCAAGCTATGAATTTCAGAGGGAATTCACACAAGGAGTAAAGCCTGATTGGACG
ATTGCGCGGATTGAACACTCCAAGTTACTAGAATAA

Translation (291 aa):
MALAARLLPLPLLSRPLPGPVTRLRTLGSTEVRLTLTEICCLCRRRLGSSAAPIPRYTRAWTSPALRSWS
SRRSLLGRVEHPPALASLPASPSRSYSTEEQPQQRQRTRMIILGFSNPINWVRTRIYAFLIWAYFDKEFS
IAEFSEGAKQAFAYVSKLLSQCKFDLLEELVAKEVLQILKEKVTSLSDNHKNALAADIDDIVYTSTGDIS
IYYDEKGRKFVNILMCFWYLTSANIPSESLSGANVFQVKLGDQSVETKQLLSASYEFQREFTQGVKPDWT
IARIEHSKLLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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