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Report for CCDS21285.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21285.1 Public Mus musculus 7 Saa2 23 108 98 CCDS HistoryNCBI Gene:20209Re-query CCDS DB by CCDS ID:21285.1Re-query CCDS DB by GeneID:20209See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21285.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000075982.3 ENSMUSP00000075365.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000075982.3Link to Ensembl Protein Viewer:ENSMUSP00000075365.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000075982Re-query CCDS DB by Protein ID:ENSMUSP00000075365
Original member Current member EBI ENSMUST00000210769.1 ENSMUSP00000147751.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000210769.1Link to Ensembl Protein Viewer:ENSMUSP00000147751.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000210769Re-query CCDS DB by Protein ID:ENSMUSP00000147751
Original member NCBI NM_001357491.1 NP_001344420.1 Updated not alive Link to Nucleotide Sequence:NM_001357491.1Link to Protein Sequence:NP_001344420.1Re-query CCDS DB by Nucleotide ID:NM_001357491Re-query CCDS DB by Protein ID:NP_001344420
Current member NCBI NM_001357491.2 NP_001344420.1 Accepted alive Link to Nucleotide Sequence:NM_001357491.2Link to Protein Sequence:NP_001344420.1Re-query CCDS DB by Nucleotide ID:NM_001357491Re-query CCDS DB by Protein ID:NP_001344420Link to BLAST:NP_001344420.1
Original member NCBI NM_011314.2 NP_035444.1 Updated not alive Link to Nucleotide Sequence:NM_011314.2Link to Protein Sequence:NP_035444.1Re-query CCDS DB by Nucleotide ID:NM_011314Re-query CCDS DB by Protein ID:NP_035444
Current member NCBI NM_011314.3 NP_035444.1 Accepted alive Link to Nucleotide Sequence:NM_011314.3Link to Protein Sequence:NP_035444.1Re-query CCDS DB by Nucleotide ID:NM_011314Re-query CCDS DB by Protein ID:NP_035444Link to BLAST:NP_035444.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001344420.1 122 P05367 122 100% 0 0
NP_035444.1 122 P05367 122 100% 0 0

Chromosomal Locations for CCDS 21285.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 46752291 46752381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 46753418 46753556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 46753971 46754109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (369 nt):
ATGAAGCTACTCACCAGCCTGGTCTTCTGCTCCCTGCTCCTGGGAGTCTGCCATGGAGGGTTTTTTTCAT
TTATTGGGGAGGCTTTCCAAGGGGCTGGAGACATGTGGCGAGCCTACACTGACATGAAGGAAGCTGGCTG
GAAAGATGGAGACAAATACTTCCATGCTCGGGGGAACTATGATGCTGCCCAAAGGGGTCCCGGGGGAGTC
TGGGCTGCTGAGAAAATCAGTGATGCAAGAGAGAGCTTTCAGGAATTCTTCGGCAGAGGACACGAGGACA
CCATGGCTGACCAGGAAGCCAACAGACATGGCCGCAGTGGCAAAGACCCCAATTACTACAGACCTCCTGG
ACTGCCTGCCAAATACTGA

Translation (122 aa):
MKLLTSLVFCSLLLGVCHGGFFSFIGEAFQGAGDMWRAYTDMKEAGWKDGDKYFHARGNYDAAQRGPGGV
WAAEKISDARESFQEFFGRGHEDTMADQEANRHGRSGKDPNYYRPPGLPAKY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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