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Report for CCDS36931.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36931.1 Public Mus musculus 14 Psme1 23 108 98 CCDS HistoryNCBI Gene:19186Re-query CCDS DB by CCDS ID:36931.1Re-query CCDS DB by GeneID:19186See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36931.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000174259.7 ENSMUSP00000134735.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000174259.7Link to Ensembl Protein Viewer:ENSMUSP00000134735.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000174259Re-query CCDS DB by Protein ID:ENSMUSP00000134735
Original member Current member NCBI NM_011189.1 NP_035319.1 Accepted alive Link to Nucleotide Sequence:NM_011189.1Link to Protein Sequence:NP_035319.1Re-query CCDS DB by Nucleotide ID:NM_011189Re-query CCDS DB by Protein ID:NP_035319Link to BLAST:NP_035319.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035319.1 249 P97371 249 100% 0 0

Chromosomal Locations for CCDS 36931.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 55578575 55578613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55579595 55579627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55579771 55579833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55579931 55580041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55580114 55580159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55580330 55580427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55580595 55580663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55580744 55580811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55580918 55580972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55581052 55581138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 55581301 55581381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGGCCACACTGAGGGTCCATCCCGAAGCCCAAGCCAAGGTGGATGTGTTCCGTGAAGACCTGTGTAGCA
AGACAGAGAACCTGCTTGGGAGCTATTTTCCCAAGAAAATCTCAGAGTTGGATGCGTTCTTAAAGGAGCC
AGCTCTCAATGAAGCCAACCTGAGCAATCTGAAGGCTCCATTGGACATCCCAGTACCCGATCCAGTCAAA
GAGAAAGAGAAGGAGGAGCGGAAGAAGCAACAGGAGAAGGAAGAGAAGGAAGAGAAGAAGAAAGGGGACG
AAGACGACAAAGGTCCCCCCTGTGGCCCAGTGAACTGCAATGAGAAGATTGTGGTCCTCCTGCAACGCCT
AAAACCTGAGATCAAGGATGTCACTGAGCAACTCAATCTGGTCACTACCTGGTTGCAGCTACAGATACCT
CGGATAGAGGATGGGAATAATTTTGGCGTGGCTGTCCAGGAAAAGGTGTTTGAGCTGATGACCAACCTTC
ACACCAAGCTGGAAGGCTTCCACACGCAGATCTCCAAGTACTTCTCCGAGAGGGGTGACGCCGTGGCCAA
AGCAGCCAAGCAGCCCCACGTGGGTGACTATCGGCAGCTGGTGCACGAGCTGGACGAGGCGGAGTACCAG
GAGATCCGTCTGATGGTCATGGAGATCCGAAATGCTTATGCTGTGTTATATGACATCATCCTGAAGAACT
TTGAGAAGCTCAAGAAGCCCCGTGGAGAAACCAAGGGAATGATCTATTGA

Translation (249 aa):
MATLRVHPEAQAKVDVFREDLCSKTENLLGSYFPKKISELDAFLKEPALNEANLSNLKAPLDIPVPDPVK
EKEKEERKKQQEKEEKEEKKKGDEDDKGPPCGPVNCNEKIVVLLQRLKPEIKDVTEQLNLVTTWLQLQIP
RIEDGNNFGVAVQEKVFELMTNLHTKLEGFHTQISKYFSERGDAVAKAAKQPHVGDYRQLVHELDEAEYQ
EIRLMVMEIRNAYAVLYDIILKNFEKLKKPRGETKGMIY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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