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Report for CCDS15545.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15545.1 Public Mus musculus 1 Grem2 23 108 98 CCDS HistoryNCBI Gene:23893Re-query CCDS DB by CCDS ID:15545.1Re-query CCDS DB by GeneID:23893See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15545.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055294.3 ENSMUSP00000049640.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055294.3Link to Ensembl Protein Viewer:ENSMUSP00000049640.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000055294Re-query CCDS DB by Protein ID:ENSMUSP00000049640
Original member NCBI NM_011825.1 NP_035955.1 Updated not alive Link to Nucleotide Sequence:NM_011825.1Link to Protein Sequence:NP_035955.1Re-query CCDS DB by Nucleotide ID:NM_011825Re-query CCDS DB by Protein ID:NP_035955
Current member NCBI NM_011825.2 NP_035955.1 Accepted alive Link to Nucleotide Sequence:NM_011825.2Link to Protein Sequence:NP_035955.1Re-query CCDS DB by Nucleotide ID:NM_011825Re-query CCDS DB by Protein ID:NP_035955Link to BLAST:NP_035955.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035955.1 168 O88273 168 100% 0 0

Chromosomal Locations for CCDS 15545.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 174836775 174837281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (507 nt):
ATGTTCTGGAAGCTCTCGCTGACCTTGCTCCTGGTGGCTGTGCTGGTAAAGGTAGCTGAAACACGGAAGA
ACCGGCCTGCGGGCGCCATCCCCTCGCCTTACAAGGATGGTAGCAGCAACAACTCAGAGAGGTGGCATCA
CCAGATCAAGGAGGTGCTGGCCTCCAGCCAGGAGGCCCTGGTAGTCACCGAGCGCAAGTACCTCAAGAGT
GACTGGTGCAAGACGCAGCCTCTGCGGCAGACAGTGAGCGAGGAGGGTTGCCGCAGCCGCACCATCCTCA
ACCGCTTCTGCTACGGCCAGTGCAACTCCTTCTACATCCCGCGACACGTGAAGAAGGAGGAGGACTCCTT
CCAATCCTGCGCTTTCTGCAAGCCCCAGCGTGTCACCTCTGTCATCGTAGAGCTCGAATGCCCGGGTCTC
GACCCACCTTTCCGAATCAAGAAAATCCAGAAGGTGAAGCATTGCCGGTGCATGTCAGTGAACCTGAGTG
ACTCCGACAAGCAGTGA

Translation (168 aa):
MFWKLSLTLLLVAVLVKVAETRKNRPAGAIPSPYKDGSSNNSERWHHQIKEVLASSQEALVVTERKYLKS
DWCKTQPLRQTVSEEGCRSRTILNRFCYGQCNSFYIPRHVKKEEDSFQSCAFCKPQRVTSVIVELECPGL
DPPFRIKKIQKVKHCRCMSVNLSDSDKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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