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Report for CCDS37492.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37492.1 Public Mus musculus 17 Rnf151 23 108 98 CCDS HistoryNCBI Gene:67504Re-query CCDS DB by CCDS ID:37492.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 37492.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000008626.9 ENSMUSP00000008626.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000008626.9Link to Ensembl Protein Viewer:ENSMUSP00000008626.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000008626Re-query CCDS DB by Protein ID:ENSMUSP00000008626
Original member Current member NCBI NM_026205.3 NP_080481.1 Accepted alive Link to Nucleotide Sequence:NM_026205.3Link to Protein Sequence:NP_080481.1Re-query CCDS DB by Nucleotide ID:NM_026205Re-query CCDS DB by Protein ID:NP_080481Link to BLAST:NP_080481.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080481.1 239 Q9CQ29 239 100% 0 0

Chromosomal Locations for CCDS 37492.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 24716236 24716709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 24717066 24717162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 24717463 24717608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 24717983 24717985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (720 nt):
ATGAGTGGTGGGTACGATCTCAACCTCTTTGCCAGCCCTCCTGACTGCAAGTTCCTGTGTTCTGTCTGCC
ATGGGGTTCTCAAGAGGCCAACGAGGTTGCCGTGCAGTCACATCTTCTGTAAAAAGTGCATCTTCAGGTG
GCTAGCCAGACAAAACACCTGTCCATGCTGTAGAAAAGAGGTGACAAGGAGAAAGATGGTCGAAGTGAAT
AAACTCCGAAAAACCATTGGCCGCCTACAAGTCAAGTGCAAGAACGCTGCAGCCGGCTGCTTGGACACAC
ACCCTCTGGCTCATCGCAAGGAGCATCAGGACTCATGCCCCTTTGAGCTGATGGCCTGCCCCAATGAGGG
TTGCACTGTGCAGGTGCTGCGAGGGGTCCTGGATGAACACCGCCAGCATTGCCAGCAGAATGGACAGCAG
CGCTGCCCCTTAGGCTGTGGGTCCACCCTGGCTGCCTTGGAAGGTGAGCACCACAACTGCTACCGCGAGC
TACGTGATGCTTGGGTCCAACGCCATGAGCGCAACCGGACCCTGCTGCTGGGCCTGCTGGGGCGTGTACG
CCGGGTGCACCTCACCACCAGCATCATCCACCAGCAGCTGGCACAGCTGAGCAACTTCCTGGAGGATGAT
GATAACCTGCTCCTGAATGCCCAGGTGCAAGAGACTGAGGTTACCCCGGAGGCTGAGATGAGGGGTACGC
AGGGCCAAAGTGTCTTATAG

Translation (239 aa):
MSGGYDLNLFASPPDCKFLCSVCHGVLKRPTRLPCSHIFCKKCIFRWLARQNTCPCCRKEVTRRKMVEVN
KLRKTIGRLQVKCKNAAAGCLDTHPLAHRKEHQDSCPFELMACPNEGCTVQVLRGVLDEHRQHCQQNGQQ
RCPLGCGSTLAALEGEHHNCYRELRDAWVQRHERNRTLLLGLLGRVRRVHLTTSIIHQQLAQLSNFLEDD
DNLLLNAQVQETEVTPEAEMRGTQGQSVL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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