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Report for CCDS15179.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15179.1 Public Mus musculus 1 Dusp28 23 108 98 CCDS HistoryNCBI Gene:67446Re-query CCDS DB by CCDS ID:15179.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15179.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000060913.7 ENSMUSP00000057690.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000060913.7Link to Ensembl Protein Viewer:ENSMUSP00000057690.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000060913Re-query CCDS DB by Protein ID:ENSMUSP00000057690
Original member Current member NCBI NM_175118.3 NP_780327.1 Accepted alive Link to Nucleotide Sequence:NM_175118.3Link to Protein Sequence:NP_780327.1Re-query CCDS DB by Nucleotide ID:NM_175118Re-query CCDS DB by Protein ID:NP_780327Link to BLAST:NP_780327.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780327.1 163 Q8BTR5 163 100% 0 0

Chromosomal Locations for CCDS 15179.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 92907055 92907423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 92907565 92907687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (492 nt):
ATGGGCACCTCGGAGGCTGCACCGCCGCCTTTCGCGCGCGTCGCCCCCGCGCTCTTCATCGGGAATGCGC
GAGCCGCGGGTGCGACGGAGCTGCTGGTGCGCGCGGGCATCACTTTGTGCGTCAATGTCTCCCGCCAGCA
GCCCGGGCCGCGCGCGCCCGGAGTGGCGGAACTACGCGTACCCGTGTTCGACGACCCAGCTGAGGACCTG
CTGACACACCTGGAGCCCACCTGTGCCGCCATGGAAGCCGCGGTGCGCGACGGCGGCTCCTGTCTCGTGT
ACTGCAAGAACGGCCGCAGTCGCTCAGCCGCCGTCTGCACCGCCTACCTAATGCGGCACCGCGGCCACAG
CCTGGATCGCGCCTTCCAGATGGTGAAGAGCGCCCGCCCGGTAGCCGAGCCCAATTTGGGGTTCTGGGCT
CAGCTGCAGAAGTACGAGCAGACCCTTCAGGCCCAGGCCATCCTGCCCCGGGAGCCCATTGATCCGGAGT
AA

Translation (163 aa):
MGTSEAAPPPFARVAPALFIGNARAAGATELLVRAGITLCVNVSRQQPGPRAPGVAELRVPVFDDPAEDL
LTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARPVAEPNLGFWA
QLQKYEQTLQAQAILPREPIDPE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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