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Report for CCDS84654.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84654.1 Public Mus musculus 3 Oaz3 23 108 98 CCDS HistoryNCBI Gene:53814Re-query CCDS DB by CCDS ID:84654.1Re-query CCDS DB by GeneID:53814See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)


Attributes
Non-AUG initiation codon
Ribosomal slippage (translational frameshift)

Sequence IDs included in CCDS 84654.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000191506.6 ENSMUSP00000139408.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000191506.6Link to Ensembl Protein Viewer:ENSMUSP00000139408.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000191506Re-query CCDS DB by Protein ID:ENSMUSP00000139408
Original member Current member EBI ENSMUST00000199678.3 ENSMUSP00000143080.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000199678.3Link to Ensembl Protein Viewer:ENSMUSP00000143080.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000199678Re-query CCDS DB by Protein ID:ENSMUSP00000143080
Original member Current member NCBI NM_016901.3 NP_058597.2 Accepted alive Link to Nucleotide Sequence:NM_016901.3Link to Protein Sequence:NP_058597.2Re-query CCDS DB by Nucleotide ID:NM_016901Re-query CCDS DB by Protein ID:NP_058597Link to BLAST:NP_058597.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058597.2 243 Q9R109-1 243 100% 0 0

Chromosomal Locations for CCDS 84654.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 94433507 94433640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94434464 94434549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94434971 94435146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94435956 94436033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94436035 94436125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 94436388 94436554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. This works on the replacement symbol in the Translation Exceptions section also.

Translation Exceptions:
replace the symbol L (codon CTG) with M at amino acid position 1

Nucleotide Sequence (732 nt):
CTGCCTTGTAACAGGTCCCGCCCCTCTCTCTACTCCCTTTCTTATATCAAGAGGGGAAAAACACGGAACT
ATCTCTATCCATTCTGGTCACCATTCGCCTATTACCTCTACTGTTACAAATACCGGATCACCCTCCGGGA
GAAGATGCTGCCTTGTTGTTACAAAAGCATCACTTACAAGGAACAGGAGGACCTGACTCTCCGGCCCCAT
TGCTGCCTCCCGTGCTCCTGCCTCCCGTGCTCCTGCCTCCAGTGCTCCGAGTCCCTAGGAGGCCTCCAGG
TGGGTAGGAGCACTGCACAGGAAAAAGACCACAGCCAGCTTAAAGAACTCTATTCAGCTGGGAACCTGAC
AGTGCTATCAACTGACCCCCTGCTTCACCAAGATCCAGTTCAGTTAGACTTCCACTTTCGTCTTACCCCC
CATTCCTCTGCTCATTGGCACGGCCTTCTGTGTGATCACCGACTCTTCCTGGATATCCCATATCAGGCCT
TGGATCAAGGCAACCGAGAAAGCTTGACAGCAACACTGGAGTATGTGGAGGAGAAAACCAATGTGGACTC
TGTGTTTGTGAACTTCCAAATCGATCGGAAGGACAGAGGTGCCCTGCTGCGAGCCTTTAGCTACATGGGC
TTCGAGGTGGTTAGACCAGATCATCCTGCCCTCCCTCCCTGGGACAATGTCATCTTCATGGTGTATCCCC
TTGAAAGGGACCTTGGCCACCCTGGCCAGTGA

Translation (243 aa):
MPCNRSRPSLYSLSYIKRGKTRNYLYPFWSPFAYYLYCYKYRITLREKMLPCCYKSITYKEQEDLTLRPH
CCLPCSCLPCSCLQCSESLGGLQVGRSTAQEKDHSQLKELYSAGNLTVLSTDPLLHQDPVQLDFHFRLTP
HSSAHWHGLLCDHRLFLDIPYQALDQGNRESLTATLEYVEEKTNVDSVFVNFQIDRKDRGALLRAFSYMG
FEVVRPDHPALPPWDNVIFMVYPLERDLGHPGQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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