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Report for CCDS52204.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52204.1 Public Mus musculus 7 Zfp507 23 108 98 CCDS HistoryNCBI Gene:668501Re-query CCDS DB by CCDS ID:52204.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52204.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061586.10 ENSMUSP00000058609.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061586.10Link to Ensembl Protein Viewer:ENSMUSP00000058609.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000061586Re-query CCDS DB by Protein ID:ENSMUSP00000058609
Original member Current member NCBI NM_177739.3 NP_808407.2 Accepted alive Link to Nucleotide Sequence:NM_177739.3Link to Protein Sequence:NP_808407.2Re-query CCDS DB by Nucleotide ID:NM_177739Re-query CCDS DB by Protein ID:NP_808407Link to BLAST:NP_808407.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808407.2 941 Q6ZPY5 941 100% 0 0

Chromosomal Locations for CCDS 52204.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 35775961 35776327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35776438 35776572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35787718 35787832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35791648 35791762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35793523 35795616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2826 nt):
ATGGAAGAAAGCAGCAGCATTGCCATGTTGGTGCAAGAGATTGGAGAACCGGAGGCTGTGTTAACTGCTG
AAGGAGTCCTCAGCCCTTCCTCAGAAGTTGACCAACAAAGAAAAGCTAAAGCAGATCCATTGGTCCACGT
TATCCAGAAGCTAAGCAAGATAGTGGGGCATGAGAAGTCACAAAAATGTCTACTGATTGGGAAAAAGCGC
CCACGTCCAAGTGAGACAGCAAACTCTCTTGAAAAGCTAGAGAACTGTGAGATTCCAGCTAAAGCCACTG
AGTCCCCTGCTGCTGGGGTTAGGAAAACCGAGATGTCACAGGCAAGTTCCACTCTTGCTTCAAATGATGG
GAAGGCTATGTCCTACCAGTGTAGCCTTTGTAAGTTCCTGTCACCATCCTTTTCTGTGCTGAAAGAGCAC
GTCAAGCAGCATGGGCAGCAGCATGACGTGATGCTCATGTGCTCGGAGTGCCACGCCACCTCCAGGAGCC
AGCAGGAGCTCGAAGCGCACGTGGTGAGTGAGCACGAGAACAGTGCCAGTAGCCAGGCCCGGTCCAGCCC
CTCCGGTCAGGGAGCCACAGAAAGAAAGAGTGAGACCATGGTAGACATCCCAGTGAACATGGGCAGTCCA
CAGACCCATGCTGTCCAGAGTGCAGCCATGGCAGAGTCGGGTCGGAGGAAGTGGTATGCATATGAACAGT
ATGGCATGTACCGGTGCTTATTCTGTAGCTACACCTGCGGCCAGCAGCGGATGTTAAAGACACATGCTTG
GAAACATGCAGGGGAAGTTAACTGCTCCTACCCAATCTTTGAGAATGAAAATGAGCCCCTTGGCCTTCTG
GCTTCTTCTATGTCTGCTGCACCTGGTGGGGTTGATGCAGTTGTCATTGCTATTGGGGACAGCGAGCTGA
GCATCCACAATGGGCCATCTGTACAAGTACAGATTTGCAGCTCTGACCCACCGTCTTCATCTCCTTTAGA
ACAAAGCACAGAGGAGGGAGTACACCTAAACCAGGCAGTCACGCTGGACGCTAACGAGGAAGAAATGCTG
GAGGTGATGTCTGATTCCGAGGAGAATCTCTTTGCTGATAGTTTGCTATCTTCAGCACAGAAAATCATTA
GCAGTAGCCCAAACAAAAAAGGTCACGTGAATGTCATTGTGGAACGTTTGCCAAGTGCTGAAGAAACCCT
CCCACCAAAACATTTCCTCATTAATGCCGAAATGGAAGAGGGGAAGAGCCCGAGCCCCTCCGAAGCCCAG
ACTGGGTGTGTAGGAGCAGGAAATATGTACCATGCTGATAAATGTACTGTTGATATTGGGGGGTTGATCA
TCGGCTGGAGCAGTGCAGAGAAGAAAGACAGTGAGCTAAGTAAGGGCCTGGCTCCTGATGAGAATGCCCC
ACCAGGACGGAGAAGGACAAATTCTGAGTCTCTCAGGCTGCACTCCTTAGCTGCAGAAGCCCTTGTCACC
ATGCCGATAAGAGCTGCTGAACTAACAAGAGCCAGCCTTGGGCACTATGGGGACATAAACCTTTTAGATC
CAGACACTGGACAAAGGCAGGTCAGTGGTCCATTGGCAACATACTCAAAAAAAATCATGTCTCCTCTTAA
GAATTCTACAGATGGAGTAACAAGTTTTAACCAAAGCAATTCCACTGTGGTAGCTCTCCCAGAGGGAAGG
CAGGAATTGTCAGATGGGCAAGTTAAGACAGGCATCAGTATGTCCCTTCTTACCGTAATAGAAAAACTGA
GAGAAAGGACAGACCAGAATGCATCAGATGATGACATTTTGAAAGAGTTGCAGGACAATGCCCAGTGTCA
GCCCAACAGCGATGGGAGTTTGTTGGGGTCCAACGTGGTGGAGTACATCCCAGATGCCGAGCGGCCCTAC
CGATGCCGCCTGTGCAACTACTCAAGTGGCAACAGGGGCTACATCAAGCAGCACCTGCGTGTCCATCGGC
AGAGGCAGCCTTACCAGTGTCCTATCTGTGAGCACATAGCTGAGAACAGCAAAGACTTGGAAAGCCACAT
GATCAACCACTGTAAAACCAGAATACACCAATGTAAGCAGTGCAAAGAATCTTTCCATTACAAGAGCCAA
CTGAGGAATCATGAGAGAGAGCAGCACTGCCTGCCCAACACCTTGTCAGTAGCTTCGAATGAGCCAAGAA
TTTCCCGTGATGCCGCTGATGGAAAGTGTGCTCAGGAAGGGAACAAGCCTTCAACCCAGAAACAGTATAG
GTGTGATGTGTGTGATTACACAAGTACAACGTACGTCGGCGTCAGGAACCACAGACGAGTCCATAACTCA
GATAAGCCATACAGGTGCTCCTTGTGTGGGTATGTGTGCAGCCACCCCCCTTCCTTGAAGTCACACATGT
GGAAACATGCAAGTGACCAGAACTACAACTACGAGCAAGTTAACAAGGCCATCAATGATGCAATCTCACA
AAGCGCCAGAGTTCTGGGGAAATCCCGTGGGAAACCGCTCTTAACCAGCAGTGAAGAGAGAACTGGCCCT
ACCACAGGCAGTCCAGAAAACTTGGTGTCGTCCTCAGAGCTCACTTCCCAGCTGCCCGGTGAAGTTATGG
ACGCCAGCGAGCTTGAGAAACTGAACCCCACAGGCTGCAGCTCTGACGTCTCAGGAAGAAGCTGCAGCCT
GGCCGCACCAGGCACCGAGTACTGCGTGTTGCTCTTCTGCTGCTGCATCTGCGGCTTTGAGTCAACCAGC
AAGGAGAGCCTCCTGGATCACATGAAGGAACATGAGGGGGAGATCGTCAGCATCATCCTGAACAAGGACC
ACAGCACAGCCCTGAATGCCAACTAG

Translation (941 aa):
MEESSSIAMLVQEIGEPEAVLTAEGVLSPSSEVDQQRKAKADPLVHVIQKLSKIVGHEKSQKCLLIGKKR
PRPSETANSLEKLENCEIPAKATESPAAGVRKTEMSQASSTLASNDGKAMSYQCSLCKFLSPSFSVLKEH
VKQHGQQHDVMLMCSECHATSRSQQELEAHVVSEHENSASSQARSSPSGQGATERKSETMVDIPVNMGSP
QTHAVQSAAMAESGRRKWYAYEQYGMYRCLFCSYTCGQQRMLKTHAWKHAGEVNCSYPIFENENEPLGLL
ASSMSAAPGGVDAVVIAIGDSELSIHNGPSVQVQICSSDPPSSSPLEQSTEEGVHLNQAVTLDANEEEML
EVMSDSEENLFADSLLSSAQKIISSSPNKKGHVNVIVERLPSAEETLPPKHFLINAEMEEGKSPSPSEAQ
TGCVGAGNMYHADKCTVDIGGLIIGWSSAEKKDSELSKGLAPDENAPPGRRRTNSESLRLHSLAAEALVT
MPIRAAELTRASLGHYGDINLLDPDTGQRQVSGPLATYSKKIMSPLKNSTDGVTSFNQSNSTVVALPEGR
QELSDGQVKTGISMSLLTVIEKLRERTDQNASDDDILKELQDNAQCQPNSDGSLLGSNVVEYIPDAERPY
RCRLCNYSSGNRGYIKQHLRVHRQRQPYQCPICEHIAENSKDLESHMINHCKTRIHQCKQCKESFHYKSQ
LRNHEREQHCLPNTLSVASNEPRISRDAADGKCAQEGNKPSTQKQYRCDVCDYTSTTYVGVRNHRRVHNS
DKPYRCSLCGYVCSHPPSLKSHMWKHASDQNYNYEQVNKAINDAISQSARVLGKSRGKPLLTSSEERTGP
TTGSPENLVSSSELTSQLPGEVMDASELEKLNPTGCSSDVSGRSCSLAAPGTEYCVLLFCCCICGFESTS
KESLLDHMKEHEGEIVSIILNKDHSTALNAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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