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Report for CCDS59622.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59622.1 Public Mus musculus 15 Bin2 23 108 98 CCDS HistoryNCBI Gene:668218Re-query CCDS DB by CCDS ID:59622.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59622.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000183211.7 ENSMUSP00000138523.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000183211.7Link to Ensembl Protein Viewer:ENSMUSP00000138523.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000183211Re-query CCDS DB by Protein ID:ENSMUSP00000138523
Original member Current member NCBI NM_001270537.2 NP_001257466.1 Accepted alive Link to Nucleotide Sequence:NM_001270537.2Link to Protein Sequence:NP_001257466.1Re-query CCDS DB by Nucleotide ID:NM_001270537Re-query CCDS DB by Protein ID:NP_001257466Link to BLAST:NP_001257466.1

Chromosomal Locations for CCDS 59622.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 100641535 100641564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100644813 100645539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100649080 100649162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100650200 100650275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100651959 100652044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100652385 100652492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100656195 100656290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100656710 100656804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100657060 100657114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100662517 100662597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 100669413 100669493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1518 nt):
ATGGCAGAGGGCAAGGCGGGCGGAGCGGCTGGCCTCTTCGCCAAGCAGATGCAGAAGAAGTTCAGCAGGG
CCCAGGAGAAGGTTCTGCAGAAATTGGGGAAAACCGTAGAAACCAAAGACGAGCGATTTGAACAAAGTGC
CAGCAACTTCTACCAACAGCAGGCAGAAGGCCACAAGCTGTACAAGGACCTGAAGAACTTCCTTAGTGCA
GTCAAAGTGATGCATGAAAGCTCAAAGAGAGTATCAGAGACCCTGCAGGAGGTCTACAGCAGCGACTGGG
ATGGGCATGAGGACCTGAAGGCCATTGTGGGGAACAATGACCTCCTTTGGGAAGACTATGAAGAGAAACT
GGCTGACCAGGCCTTGAGGACCATGGAGAATTATGTGTCGCAGTTCAGCGAGATTAAGGAGAGGATTGCC
AAGCGGGGCCGGAAACTGGTAGACTACGATAGTGCCCGCCATCACCTGGAGGCCGTGCAGAATGCTAAGA
AGAAGGATGACGCCAAGATGGCTAAGGCAGAAGAAGACTTCAGCAAGGCCCAGATTGTATTTGAAGATCT
GAACCAGGAACTCCTGGAGGAGTTGCCTATTCTTTATAACAGTCGTATTGGCTGCTATGTGACTGTCTTC
CAAAACATTTCCAACCTGAGAGACGTCTTCTACAGGGAGATGAGCAAGTTGAACCACAATCTCTACGAAG
TGATGAGCAAACTGGAGAAACAACATTCCAACAAAGTCTTTGTGGTGAAGGGCCTGTCAAGCAGCAGCCG
GCGCTCCTTAGTCATCTCTCCCCCAGTACAAAGCTGTGCAGCCTCCAGCCCTGTCAGCCCTGTCAGCCCT
GTCAGCCCCGTGACCTCACCCACTAGCCCCTCTGCGACCAGTGAGCCTGAGTCTGTCTCAGCCACGGGAG
AGGAGCTGACCTCTGAGGCAGGGGGAGAGGACAGCTGTGAGAGTCAAGAGTCCTTAAAGGATGAAGAAGC
GGATGAAGCCCAGTCAGAAACAAGCTCGTCAGAGGAGGAGGACGAGGAGGACGAGGAGGATGAGGAGGAT
GAGGAAGAGCCTCTACCAGCCTGCAACGGCCCCACCCCGGCCCCAGCCTCTCCTGCAGCTGAGGTCGGAT
CCCAGGAGGAAGCTCTGAGCTCCTCAGCTCAGTCTCCGGGCAGAGGTCAGACAGGGAAGGATACTCCTTC
CCCGGGGGATGTGGTCCTCCGTGCCCGAGCCTCCAGCGAGGGAGCAGAGCAGAGCAAAAGAGCAGCATCC
ATCCAGAGGACGTCAGCTCCGCCCAGCAGGCCTCCGCCACCCAGAGCCTCAGGCAGCGGGTCCTGCAATG
CCCCAGGCTCTCCAGAGGGTTCTTCACAGCTGTGCAGCCCCAGGGCCTCCCCAGACGCCTCTTCTAATCC
AGAACCAGCAGAAACCAGAGAAAAGGAAGGCGCTGGAAGTTCAGGCCCAGAAGAGCCCCGTGCCGTCTCT
ACCAAGAGCGCCACCCAGGTATTTACCAGTGAAAACACGGAGCTCTGA

Translation (505 aa):
MAEGKAGGAAGLFAKQMQKKFSRAQEKVLQKLGKTVETKDERFEQSASNFYQQQAEGHKLYKDLKNFLSA
VKVMHESSKRVSETLQEVYSSDWDGHEDLKAIVGNNDLLWEDYEEKLADQALRTMENYVSQFSEIKERIA
KRGRKLVDYDSARHHLEAVQNAKKKDDAKMAKAEEDFSKAQIVFEDLNQELLEELPILYNSRIGCYVTVF
QNISNLRDVFYREMSKLNHNLYEVMSKLEKQHSNKVFVVKGLSSSSRRSLVISPPVQSCAASSPVSPVSP
VSPVTSPTSPSATSEPESVSATGEELTSEAGGEDSCESQESLKDEEADEAQSETSSSEEEDEEDEEDEED
EEEPLPACNGPTPAPASPAAEVGSQEEALSSSAQSPGRGQTGKDTPSPGDVVLRARASSEGAEQSKRAAS
IQRTSAPPSRPPPPRASGSGSCNAPGSPEGSSQLCSPRASPDASSNPEPAETREKEGAGSSGPEEPRAVS
TKSATQVFTSENTEL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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