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Report for CCDS21815.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21815.1 Public Mus musculus 7 Prkcb 23 108 98 CCDS HistoryNCBI Gene:18751Re-query CCDS DB by CCDS ID:21815.1Re-query CCDS DB by GeneID:18751See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21815.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000064989.11 ENSMUSP00000070019.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000064989.11Link to Ensembl Protein Viewer:ENSMUSP00000070019.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000064989Re-query CCDS DB by Protein ID:ENSMUSP00000070019
Original member Current member EBI ENSMUST00000143692.7 ENSMUSP00000138788.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000143692.7Link to Ensembl Protein Viewer:ENSMUSP00000138788.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000143692Re-query CCDS DB by Protein ID:ENSMUSP00000138788
Original member Current member NCBI NM_008855.2 NP_032881.1 Accepted alive Link to Nucleotide Sequence:NM_008855.2Link to Protein Sequence:NP_032881.1Re-query CCDS DB by Nucleotide ID:NM_008855Re-query CCDS DB by Protein ID:NP_032881Link to BLAST:NP_032881.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032881.1 673 P68404-2 673 100% 0 0

Chromosomal Locations for CCDS 21815.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 122289345 122289517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122290513 122290544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122424959 122425041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122457215 122457326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122458044 122458172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122516829 122516985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122518045 122518179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122528476 122528572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122544633 122544779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122568134 122568307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122582430 122582521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122584398 122584460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122590045 122590183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122594603 122594683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122594966 122595073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122600690 122600830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 122627656 122627814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2022 nt):
ATGGCTGACCCGGCTGCGGGGCCGCCGCCGAGCGAGGGCGAGGAGAGCACAGTGCGCTTCGCCCGCAAAG
GCGCCCTCCGGCAGAAGAACGTGCACGAGGTGAAGAACCACAAATTCACCGCCCGCTTCTTCAAGCAGCC
CACCTTCTGCAGCCACTGCACCGACTTCATCTGGGGCTTCGGGAAGCAGGGATTCCAGTGTCAAGTCTGC
TGCTTTGTTGTACACAAGCGCTGCCATGAGTTCGTCACGTTCTCCTGCCCCGGTGCGGACAAGGGCCCGG
CCTCTGATGACCCCCGGAGCAAACACAAGTTTAAGATCCACACGTACTCCAGTCCTACCTTCTGTGACCA
CTGTGGATCGCTGCTGTATGGACTTATTCACCAGGGGATGAAATGCGACACCTGTATGATGAACGTGCAC
AAGCGCTGCGTGATGAACGTCCCCAGCCTCTGCGGCACTGACCACACGGAACGCCGCGGCCGCATCTATA
TCCAGGCCCACATCGACAGAGAGGTTCTCATTGTTGTTGTAAGAGATGCTAAAAATCTGGTACCTATGGA
CCCCAATGGCTTGTCAGATCCCTACGTTAAACTGAAACTGATCCCTGATCCCAAAAGTGAGAGCAAACAG
AAGACCAAGACCATCAAGTGTTCCCTCAATCCAGAGTGGAATGAAACCTTCAGATTTCAGCTGAAGGAAT
CAGACAAAGACAGAAGACTGTCTGTAGAGATCTGGGATTGGGACCTGACCAGCAGGAATGACTTCATGGG
ATCTCTGTCATTTGGGATTTCAGAACTACAGAAAGCCGGTGTGGATGGCTGGTTCAAGTTACTAAGCCAG
GAAGAGGGTGAATACTTCAATGTGCCCGTGCCGCCCGAAGGAAGCGAGGGCAATGAAGAGCTGCGGCAGA
AGTTTGAGAGAGCCAAGATTGGCCAAGGTACCAAGGCTCCAGAAGAAAAGACAGCTAACACTATCTCCAA
ATTTGACAACAATGGCAACAGGGACCGGATGAAACTGACCGATTTTAACTTCCTGATGGTGCTGGGGAAA
GGCAGCTTTGGCAAGGTCATGCTCTCAGAGCGGAAGGGTACAGATGAACTCTATGCCGTGAAGATCCTGA
AGAAGGACGTGGTGATCCAAGATGACGATGTGGAGTGCACCATGGTGGAGAAGCGGGTGCTGGCCCTGCC
TGGGAAGCCCCCGTTCCTGACTCAGCTCCATTCCTGCTTCCAGACCATGGACCGCCTGTACTTTGTGATG
GAGTATGTGAACGGGGGTGACCTCATGTACCACATCCAACAAGTTGGCCGTTTCAAGGAGCCCCATGCTG
TATTTTACGCCGCAGAGATTGCCATCGGTCTGTTCTTCTTGCAGAGCAAGGGCATTATTTACCGCGACCT
GAAACTTGACAACGTGATGCTGGATTCTGAGGGGCACATCAAAATCGCTGACTTTGGCATGTGTAAGGAG
AACATCTGGGATGGGGTGACAACCAAGACATTCTGTGGCACTCCGGACTACATTGCTCCAGAGATCATTG
CTTATCAGCCCTACGGGAAGTCTGTGGACTGGTGGGCATTTGGAGTCCTGCTGTATGAAATGTTGGCTGG
CCAGGCACCGTTTGAAGGGGAGGATGAGGATGAACTCTTCCAGTCAATCATGGAACACAATGTGGCGTAT
CCCAAGTCCATGTCCAAGGAAGCCGTGGCAATCTGCAAAGGGCTAATGACCAAACACCCAGGCAAGCGCC
TGGGTTGTGGGCCTGAAGGGGAACGAGACATTAAGGAGCATGCGTTTTTCCGGTATATTGACTGGGAGAA
ACTCGAACGCAAGGAGATTCAGCCACCTTATAAACCAAAAGCTTGTGGGCGAAACGCTGAAAACTTCGAC
CGGTTTTTCACCCGCCATCCACCAGTCCTAACACCTCCTGACCAGGAAGTCATCAGGAATATTGACCAAT
CAGAATTCGAAGGATTTTCCTTTGTTAACTCTGAATTTTTAAAACCTGAAGTCAAGAGCTAA

Translation (673 aa):
MADPAAGPPPSEGEESTVRFARKGALRQKNVHEVKNHKFTARFFKQPTFCSHCTDFIWGFGKQGFQCQVC
CFVVHKRCHEFVTFSCPGADKGPASDDPRSKHKFKIHTYSSPTFCDHCGSLLYGLIHQGMKCDTCMMNVH
KRCVMNVPSLCGTDHTERRGRIYIQAHIDREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQ
KTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAGVDGWFKLLSQ
EEGEYFNVPVPPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGK
GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM
EYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE
NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY
PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGRNAENFD
RFFTRHPPVLTPPDQEVIRNIDQSEFEGFSFVNSEFLKPEVKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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