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Report for CCDS84477.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84477.1 Under review, update Mus musculus 2 Myo3a 23 108 98 CCDS HistoryNCBI Gene:667663Re-query CCDS DB by CCDS ID:84477.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Provisional (this record has not been manually reviewed by the collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 84477.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044749.13 ENSMUSP00000046329.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044749.13Link to Ensembl Protein Viewer:ENSMUSP00000046329.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000044749Re-query CCDS DB by Protein ID:ENSMUSP00000046329
Original member NCBI NM_148413.3 NP_680779.3 Updated not alive Link to Nucleotide Sequence:NM_148413.3Link to Protein Sequence:NP_680779.3Re-query CCDS DB by Nucleotide ID:NM_148413Re-query CCDS DB by Protein ID:NP_680779
Current member NCBI NM_148413.4 NP_680779.4 Pending alive Link to Nucleotide Sequence:NM_148413.4Link to Protein Sequence:NP_680779.4Re-query CCDS DB by Nucleotide ID:NM_148413Re-query CCDS DB by Protein ID:NP_680779Link to BLAST:NP_680779.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_680779.4 1613 Q8K3H5 1613 97.7061% 0 37

Chromosomal Locations for CCDS 84477.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 22227636 22227642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22241051 22241235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22245516 22245650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22266057 22266161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22267104 22267203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22282587 22282663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22291806 22291951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22294473 22294538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22297563 22297718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22323574 22323673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22332371 22332487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22333428 22333532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22333628 22333711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22340114 22340316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22361593 22361691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22362029 22362143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22396222 22396348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22399762 22399972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22407310 22407454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22423217 22423370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22542415 22542503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22544335 22544464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22546337 22546416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22546858 22546935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22558215 22558420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22564991 22565102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22567689 22567851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22574230 22574353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22577341 22578229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22579713 22579857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22600082 22600188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22601110 22601150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22602119 22602262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 22618049 22618169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4866 nt):
ATGCAGATGACAGAAACCTTTGAGATGCTTCCATTAATTGGAAAAACAATCATCTTTGATAACTTTCCTG
ATCCTTCTGATACATGGGAAATCATTGAAACCATCGGCAAAGGAACTTATGGGAAGGTTTTCAAAGTCCT
GAATAAGAAAAGTGGCCAGAAAGCAGCAGTCAAAATTTTGGATCCAATCCATGATATCGATGAAGAGATT
GAAGCAGAGTATAACATCTTAAGAACACTTTCTGACCACCCAAATGTGGTCAGATTCTACGGGATTTACT
TTAAAAAGGACAAGATAAATGGAGATAAGCTATGGCTGGTTCTGGAGCTGTGCAATGGAGGATCAGTGAC
TGATCTTGTGAAAGGATTTCTGAAGAGGGGAGAAAGAATGAGCGAGCCTGTAATTGCATATATTTTACAC
GAAGCACTAATGGGACTTCAGCATCTTCATAGCAACAAAACCATCCACCGTGATGTCAAAGGAAATAACA
TCCTGTTGACTACTGAAGGTGGAGTAAAACTAGTAGATTTTGGTGTGTCTGCACAGCTCAGCAGCACCCG
GCACCGCCTGAACACCTCCGTAGGAACACCATTTTGGATGGCTCCTGAGGTGATTGCTTGTGAACAGCAA
CTAGATACCACTTACGATGCTAGATGTGACACATGGTCCCTGGGTATCACGGCTATTGAGCTTGGTGATG
GAGATCCTCCACTAGCTGAGCTGCATCCCATGAGAGCACTCTTCAAAATACCAAGGAATCCACCCCCTAA
ACTCCGGCAGCCTGAGCTGTGGTCCGCAGAGTTCAATGACTTCATTAGCAAATGCTTGACCAAAGATTAT
GAAAAGCGTCCAACAGTGTCAGATCTTTTGAAGCATAAATTTATTACTCAGATCGAGGGCAAAGATGTGA
TACTACAAAAACAACTAATGGAATTCATTGATATCCATCAATGCCTGGGAAGCACAGAGAAGGCCAGGCA
TGAACGAATTCATACCAAGAAAGGTAATTTAAATAGATCTCTCATTTCCAGTCTGAAGGATGTAGACGAT
TTGGCAACCCTAGATGTTCTGGATGAGAACACAGTGTCTGAACATCTTGAGAAATGTTATTCCAGAGATC
AGATCTATATTTATGTGGGAGATATTCTCATTGCACTGAACCCTTTTCAGAGTCTGGGTATTTATTCCAC
AAAGCTTTCTAGGTTGTATATTGGAGCAAAGAGAACTGCCAACCCACCTCACATTTTTGCAATGGCTGAT
TTGGGATACCAGTCTATGGTCACATATAATGCAGACCAGTGCATCGTTATTTCTGGAGAAAGTGGTGCTG
GCAAGACAGAGAGCGCTCATCTTCTGGTTCAACAGCTCACTGTGCTTGGAAAGGCTAATAACAGAACCCT
GCAAGAGAAGATTTTACAAATGAACAATTTGGTTGAAGCCTTTGGCAATGCCTGCACTATTATAAATGAC
AACTCCAGCAGATTTGGAAAATACTTAGAAATGAAATTTACTTCTTCTGGAGCTGTAGTTGGGGCACAGA
TTTCTGAATACCTTCTGGAAAAATCCCGTGTCATTCACCAAGCCATTGGAGAAAAAAATTTTCATATTTT
TTACTACATTTATGCTGGGTTAGCAGAAAAGAAGAAACTAGCTCTTTACAAATTGCCTGAAAACAAGCCA
CCCAGGTACTTACAAAATGACAACCTCAGAACAGTACAGGACATGATGAACAATAGTTTCTATAAATCCC
AGTATGAATTAATTGAACAATGTTTCAAAGTCATAGGTTTTACAATGGAGCAACTTGGAAGTGTATATAG
TGTACTCGCCGCCATCTTGAACGTTGGAAACATTGAATTCTCCTCGGTGGCAACTGAATACCAGATGGAC
AAGAGCTACATTTGCAATCACACTGCTCTGGAAAACTCCGCTTCTTTGCTTTGCATTCAAGCAGATGAGC
TGCAGGAAGCTCTCACCTCACACTGTGTGGTCACTAGAGGAGAAACAATTATTCGACCCAACACAGTGGA
AAAGGCTGCTGATGTCCGAGATGCCATGGCCAAAACTTTATATGGCCGTCTCTTTAGCTGGATAGTCAAT
TGTATTAACAGCTTGCTGAAGCATGACACATCACCTAGTGGGGATGAGGAGCTAAACATCGGCATTCTTG
ACATATTCGGCTTTGAAAACTTCAAAAGAAATTCCTTTGAGCAGCTGTGCATTAACATTGCAAATGAACA
GATCCAGTATTATTTTAATCAGCACGTGTTTGCATGGGAGCAGAATGAATACCTAAATGAAGATGTAGAT
GCTAGAGTTATTGAATACGAAGACAACCGGCCCCTCTTGGACATGTTTCTACAGAAGCCCATGGGCTTAT
TGTCTCTGCTTGATGAGGAAAGCAGATTTCCCAAGGCCACTGACCAGACTCTCATAGAAAAATTTGAAGA
CAACCTGAAGTCACAGTACTTCTGGAGACCCAAAAGAATGGAACTCAGTTTTGGCATTCACCACTATGCA
GGAAAAGTCCTCTATAGTGCTAGTGGGTTCTTGGCTAAAAACAGAGACACTTTCCCAACTGATATTGTGC
TGCTTTTGAGGTCATCAGAAAACAGTGTAATTCGGCAACTTGTCAACCACCCTCTGACCAAAACAGGTAA
TCTGCCACTTTCTAAAACTAAAAACATAGTAAACTATCAGATGTGGAATTCAGAGAAATCCACAAACCTG
ACCAAGGGTGAAACTAGAGATGTCACATGCCATGCCTGTGAAACCACCAATGTGAAAACACAAACGGTCT
CATCCTATTTTAGATACTCCTTGATGGATTTATTATCTAAAATGGTAGTGGGCCAACCTCATTTTGTCCG
TTGCATCAAACCAAATAATGAGCGACAGGCAAGAAAGTATGACAAGGAGAAAGTTCTGCTCCAGCTGCGT
TGCACAGGGATTTTGGAAACAGCAAGAATTCGAAGGCTTGGTTATTCACATCGGATACTCTTCGCTAACT
TTATAAAGAGGTATTACATTCTCTGCTACAAATCGAGTGAAGAGCCCCCAGTGAGCCCAGACACCTGTGC
TGCCATTTTGGAAAAGGCTGGTCTTGATAACTGGGCTCTTGGAAAAACGAAAGTGTTCCTTAAATATTAT
CATGTGGAACAGTTGAATCTAATGCGAAAGGAAGCTACCAACAAGCTTGTTTTGATTCAAGCCAGTGTCA
GAGCATTCTTGGGTGCAAGAAGATACCAAGAACTTCAGCAGAAGAGGAAGAGTAGTGCTGTAATAATACA
GTCAGCTGCAAGAAGACATCTCTTGCGAAAACATGGAAAAGAAACATCTAATGTGAAAAGTGCAGCAGGA
AGGAGCATTCGGGCTAAGGATCAGGAATTTGACTACAAGAAAAATTTTGAAACCAAAAGGGAATCTTTTG
TGAAGAAACAGACAGAAAACGCAGTGCCTACTAATGAATCCAACACTTCAACTCCAAACAACAAAGAGAG
CCCATCTGCTGGGAAGACAGCTCCCTTCAGAGCAGAGTCAAAGGCCACCAATGTTGAGAGTAACAACAGA
AGATACCATACTCAGAAGAAAATGAGCAATGTGTATGCAGAAGGACAGAATCAAGAGCTATATATTGTGG
AGGACACTTGGGCAGAAGTAAGCCCCAGGCAGAAGTATGTGCAAGACCTGGAAGAAAGCAGAAAGATGAG
GAAAGAGGAGAAAGGAGATGCTGTGATCCAGAGTTACTGTCAGTGGTACACAGAGGGAAGCAACTTTGAA
GAATCAAAAGCAACATGTCTAGAAGGAAGGGAGACATGGGAAAGGACAAGCTGCCCAGGGCTGTGGCTGA
CTGAGGAGATTTACCTGAGAAAAACTTTGGATCCTACTCTTAGCCAAAAGTCAGTCTATCAAAATGCAGA
TGGCAAAGAAAAAGAACATAAAGTATCTGTGGTTACCCAGAATGCACCGCTGGGCAACCTGGAGAGAGAC
TATCACTTGCTAGGGTTCCTTGGAGAAGAAGACACTGGACCAGTGCCTCAGGCCCAGGAAGAACACAAGG
CTGTGTCCATTCATAGCAAATACCAGAGTTCCAAGAAAAAGCAACAGCTGGGAAAGGACAGGCTGGCACC
TCCCTTTAAGAATCAAAAGATCCTTTCATCGTCCACAGAAGTAGCAAAAACCACTCACAATGTCTATCCC
TGTCCGACAAAGCAGGAGGGAGTCCATCATAGCAAGATGGTGGATGAGAGAGACTCAAAAATGGCTTCAA
AAAAAGAAGCGTGGGATTTAGCAATGTTTTCAAGACAGATATCAAAGTTATCTGAAGAGTATTTCATTCT
GCAGAAAAACTTGAATGAAATTATTTTGGCCCAGCAACTGAAGCCATTTTATCTAGGTATCTATCGCCAT
AAACCAATCAACAGACATGTTTCTACTCACCAATACCTCTCAGGTGTCTCTAAAGGGGAAGAACCAAAAA
TACTGAGACCTCCAAGACGACCTCGGAAACCCAAAACATTAAATAACCCTGAAGACTCCACATACTACTA
TCTACTCCATAAGTCAACCCAAGAAGAAAAACGGAGACCAGGAAAAGACAGTCAAGGGAAGTTATTAGGT
TTGGAAGATTTCTATTATAAGGAATTTTTGCCTACTCATTACGGACCCAAGGCACATAGCTCTAATGCAA
GAGAATGGAAAGCACTGAAGGAACCCCAGGCTCAACCCATTGAGAGTAATGAGAGGTGTTGGACCACCTC
AGAGAATGAGAGCCTGGAGGAAGAGAGGATTTCAGCCAACCCTTATGACTACAGGAGGCTCCTGCGCAAA
ACCTCCCAGCGGCAGCGCCTGGTGCAGCAGTTGTAG

Translation (1621 aa):
MQMTETFEMLPLIGKTIIFDNFPDPSDTWEIIETIGKGTYGKVFKVLNKKSGQKAAVKILDPIHDIDEEI
EAEYNILRTLSDHPNVVRFYGIYFKKDKINGDKLWLVLELCNGGSVTDLVKGFLKRGERMSEPVIAYILH
EALMGLQHLHSNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLSSTRHRLNTSVGTPFWMAPEVIACEQQ
LDTTYDARCDTWSLGITAIELGDGDPPLAELHPMRALFKIPRNPPPKLRQPELWSAEFNDFISKCLTKDY
EKRPTVSDLLKHKFITQIEGKDVILQKQLMEFIDIHQCLGSTEKARHERIHTKKGNLNRSLISSLKDVDD
LATLDVLDENTVSEHLEKCYSRDQIYIYVGDILIALNPFQSLGIYSTKLSRLYIGAKRTANPPHIFAMAD
LGYQSMVTYNADQCIVISGESGAGKTESAHLLVQQLTVLGKANNRTLQEKILQMNNLVEAFGNACTIIND
NSSRFGKYLEMKFTSSGAVVGAQISEYLLEKSRVIHQAIGEKNFHIFYYIYAGLAEKKKLALYKLPENKP
PRYLQNDNLRTVQDMMNNSFYKSQYELIEQCFKVIGFTMEQLGSVYSVLAAILNVGNIEFSSVATEYQMD
KSYICNHTALENSASLLCIQADELQEALTSHCVVTRGETIIRPNTVEKAADVRDAMAKTLYGRLFSWIVN
CINSLLKHDTSPSGDEELNIGILDIFGFENFKRNSFEQLCINIANEQIQYYFNQHVFAWEQNEYLNEDVD
ARVIEYEDNRPLLDMFLQKPMGLLSLLDEESRFPKATDQTLIEKFEDNLKSQYFWRPKRMELSFGIHHYA
GKVLYSASGFLAKNRDTFPTDIVLLLRSSENSVIRQLVNHPLTKTGNLPLSKTKNIVNYQMWNSEKSTNL
TKGETRDVTCHACETTNVKTQTVSSYFRYSLMDLLSKMVVGQPHFVRCIKPNNERQARKYDKEKVLLQLR
CTGILETARIRRLGYSHRILFANFIKRYYILCYKSSEEPPVSPDTCAAILEKAGLDNWALGKTKVFLKYY
HVEQLNLMRKEATNKLVLIQASVRAFLGARRYQELQQKRKSSAVIIQSAARRHLLRKHGKETSNVKSAAG
RSIRAKDQEFDYKKNFETKRESFVKKQTENAVPTNESNTSTPNNKESPSAGKTAPFRAESKATNVESNNR
RYHTQKKMSNVYAEGQNQELYIVEDTWAEVSPRQKYVQDLEESRKMRKEEKGDAVIQSYCQWYTEGSNFE
ESKATCLEGRETWERTSCPGLWLTEEIYLRKTLDPTLSQKSVYQNADGKEKEHKVSVVTQNAPLGNLERD
YHLLGFLGEEDTGPVPQAQEEHKAVSIHSKYQSSKKKQQLGKDRLAPPFKNQKILSSSTEVAKTTHNVYP
CPTKQEGVHHSKMVDERDSKMASKKEAWDLAMFSRQISKLSEEYFILQKNLNEIILAQQLKPFYLGIYRH
KPINRHVSTHQYLSGVSKGEEPKILRPPRRPRKPKTLNNPEDSTYYYLLHKSTQEEKRRPGKDSQGKLLG
LEDFYYKEFLPTHYGPKAHSSNAREWKALKEPQAQPIESNERCWTTSENESLEEERISANPYDYRRLLRK
TSQRQRLVQQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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