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Report for CCDS24132.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24132.2 Public Mus musculus 10 Ndufa12 23 108 98 CCDS HistoryNCBI Gene:66414Re-query CCDS DB by CCDS ID:24132.2See the combined annotation on chromosome 10 in Sequence Viewer

Public Note for CCDS 24132.1
The coding region has been updated to start at a downstream in-frame start codon that is supported by conservation data.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 24132.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020209.15 ENSMUSP00000020209.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020209.15Link to Ensembl Protein Viewer:ENSMUSP00000020209.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000020209Re-query CCDS DB by Protein ID:ENSMUSP00000020209
Original member Current member NCBI NM_025551.4 NP_079827.3 Accepted alive Link to Nucleotide Sequence:NM_025551.4Link to Protein Sequence:NP_079827.3Re-query CCDS DB by Nucleotide ID:NM_025551Re-query CCDS DB by Protein ID:NP_079827Link to BLAST:NP_079827.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079827.3 145 Q7TMF3 145 100% 0 0

Chromosomal Locations for CCDS 24132.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 94199045 94199130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 94199950 94200032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 94203288 94203375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 94220681 94220861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGGAGCTGGTGGAGGTCCTGAAGCGCGGCGTGCAGCAGGTCACCGGCCACGGCGGCCTGCGGGGCCTCC
TACGGGTTTTCTTCAGGGCAAATGATATAAGGATTGGTACACTGGTGGGAGAAGACAAATATGGAAATAA
ATACTACGAAGACAACAAGCAATTTTTTGGCCGCCACCGATGGGTCATCTACACCACCGAGATGAACGGC
AAAAACACATTCTGGGATGTGGATGGAAGCATGGTGCCTCCTGAGTGGCACCGCTGGCTTCACTGCATGA
CTGACGACCCTCCGACGACTAATCCACCGACTGCTCGTAAATTCATCTGGACAAACCATAAATTCAATGT
GTCTGCCACTCCAGAGCAATACGTTCCTTATTCCACCACTAGAAAGAAGATTCATGAATGGGTTCCACCT
TCGACACCTTACAAGTGA

Translation (145 aa):
MELVEVLKRGVQQVTGHGGLRGLLRVFFRANDIRIGTLVGEDKYGNKYYEDNKQFFGRHRWVIYTTEMNG
KNTFWDVDGSMVPPEWHRWLHCMTDDPPTTNPPTARKFIWTNHKFNVSATPEQYVPYSTTRKKIHEWVPP
STPYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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