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Report for CCDS20752.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20752.1 Public Mus musculus 7 Zfp524 23 108 98 CCDS HistoryNCBI Gene:66056Re-query CCDS DB by CCDS ID:20752.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 20752.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000086349.4 ENSMUSP00000083533.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000086349.4Link to Ensembl Protein Viewer:ENSMUSP00000083533.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000086349Re-query CCDS DB by Protein ID:ENSMUSP00000083533
Original member Current member EBI ENSMUST00000207901.1 ENSMUSP00000146921.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207901.1Link to Ensembl Protein Viewer:ENSMUSP00000146921.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000207901Re-query CCDS DB by Protein ID:ENSMUSP00000146921
Original member Current member EBI ENSMUST00000209030.1 ENSMUSP00000147095.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000209030.1Link to Ensembl Protein Viewer:ENSMUSP00000147095.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000209030Re-query CCDS DB by Protein ID:ENSMUSP00000147095
Original member NCBI NM_025324.2 NP_079600.1 Updated not alive Link to Nucleotide Sequence:NM_025324.2Link to Protein Sequence:NP_079600.1Re-query CCDS DB by Nucleotide ID:NM_025324Re-query CCDS DB by Protein ID:NP_079600
Current member NCBI NM_025324.3 NP_079600.1 Accepted alive Link to Nucleotide Sequence:NM_025324.3Link to Protein Sequence:NP_079600.1Re-query CCDS DB by Nucleotide ID:NM_025324Re-query CCDS DB by Protein ID:NP_079600Link to BLAST:NP_079600.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079600.1 321 Q9D0B1 321 100% 0 0

Chromosomal Locations for CCDS 20752.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 5017475 5018440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGGACAACCCCAGCTCAGACCCGTTGCCTTCAACTTTGTCTGGGGAGGAAGAAAAACCTCTGGCCTTAC
TGCCTCCTGTTCCCCGGGGGCGCCGAGGCCGACCTCCAGGGGGAGCCACCACCTCCAATCGGACTCTCAA
GTCCTCCCTCCCTCGAAAGAGGGGCCGTCCCCCCAGATCAGAGCAGGAAACCCCGTTGACAGCACCAGTG
GACAGCGGTGGCAGCAGCGATCTTCTGTTGATCGATGATCAGGGTGTTCCTTATACAGTTCCTGAAGGGT
CAGCAGCAGATGGGCCCCAGGGCTCTGGTTCCAAGAGGGCTCCGCACTTCTGTCCCGTGTGCCTGAGAGC
CTTCCCCTACCTCTCTGACCTGGAGCGCCACAGCATCTCACACTCAGAATTGAAGCCACACGTGTGCAAA
GATTGCGGCAAGACCTTCAAACGGTCCAGCCACTTGCGGCGCCATTGTAACATCCATGCTGGCCTTAGGC
CCTTCCGTTGTGTGCTCTGCCCTCGCCGTTTCCGAGAGGCAGGGGAGCTCGCACATCACCACCGCATCCA
CTCTGGTGAGCGACCTTACCAATGTCCCTCATGTAGGGTGCGCTTCACCGAGGCCAATACTCTCCGGCGC
CATTACAAACGCAAACACCCAGAGCTTGTGGGGATGCCTGTGCGCCTGTGCCCCCCAAACCCAAGAACCC
AACCGCTGTGGGACGACGACGAGGGCATCCCTGTTCAAGAAGGGGTACAGGAGGAGAGTCCTGAAGGAAA
GGAGCCTACTTGGCCCATATCCTCCACCACTTCTCCCCTGTCTGGGTTTACAGCAGGGGGTTCAGCTGGT
GCTGGGCGCGGGCAAGAAGGCCAAGACACCCTTGTTTCTGGTGGTATTCCCACCATGGAAGGGGATCAAA
AGCAGGGACCTAAACCTCTGGGTCCTGGTGCCATTGGGCACCCTCCTGTGGACTGA

Translation (321 aa):
MDNPSSDPLPSTLSGEEEKPLALLPPVPRGRRGRPPGGATTSNRTLKSSLPRKRGRPPRSEQETPLTAPV
DSGGSSDLLLIDDQGVPYTVPEGSAADGPQGSGSKRAPHFCPVCLRAFPYLSDLERHSISHSELKPHVCK
DCGKTFKRSSHLRRHCNIHAGLRPFRCVLCPRRFREAGELAHHHRIHSGERPYQCPSCRVRFTEANTLRR
HYKRKHPELVGMPVRLCPPNPRTQPLWDDDEGIPVQEGVQEESPEGKEPTWPISSTTSPLSGFTAGGSAG
AGRGQEGQDTLVSGGIPTMEGDQKQGPKPLGPGAIGHPPVD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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