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Report for CCDS52584.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52584.1 Public Mus musculus 8 Dda1 23 108 98 CCDS HistoryNCBI Gene:66498Re-query CCDS DB by CCDS ID:52584.1Re-query CCDS DB by GeneID:66498See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52584.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000124745.7 ENSMUSP00000121042.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000124745.7Link to Ensembl Protein Viewer:ENSMUSP00000121042.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000124745Re-query CCDS DB by Protein ID:ENSMUSP00000121042
Original member Current member NCBI NM_025600.2 NP_079876.1 Accepted alive Link to Nucleotide Sequence:NM_025600.2Link to Protein Sequence:NP_079876.1Re-query CCDS DB by Nucleotide ID:NM_025600Re-query CCDS DB by Protein ID:NP_079876Link to BLAST:NP_079876.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079876.1 102 Q9D9Z5 102 100% 0 0

Chromosomal Locations for CCDS 52584.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 71469323 71469325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71472037 71472117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71472195 71472246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71473775 71473836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 71474488 71474598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (309 nt):
ATGGCAGACTTTCTGAAAGGCTTGCCCGTCTACAACAAGAGCAACTTCAGCAGGTTCCACGCGGACTCTG
TGTGCAAGGCCTCGAACCGCCGTCCCTCAGTATACCTGCCGACCCGAGAGTACCCGTCAGAACAGATCAT
TGTGACAGAAAAGACGAACATACTTCTGCGGTACCTGCACCAGCAATGGGATAAAAAGAATGCTGCCAAG
AAGAGAGACCAAGAGCAGGTGGAGGCGGAGGGCGAGAGCTCAGCGCCACCTCGCAAGGTGGCCCGGACCG
ACAGCCCCGACATGCCGGAGGACACCTAG

Translation (102 aa):
MADFLKGLPVYNKSNFSRFHADSVCKASNRRPSVYLPTREYPSEQIIVTEKTNILLRYLHQQWDKKNAAK
KRDQEQVEAEGESSAPPRKVARTDSPDMPEDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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