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Report for CCDS91964.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91964.1 Public Homo sapiens 15 GOLGA8S 24 110 108 CCDS HistoryNCBI Gene:653061Re-query CCDS DB by CCDS ID:91964.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 91964.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000562295.3 ENSP00000455298.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000562295.3Link to Ensembl Protein Viewer:ENSP00000455298.2Re-query CCDS DB by Nucleotide ID:ENST00000562295Re-query CCDS DB by Protein ID:ENSP00000455298
Original member Current member NCBI NM_001395373.1 NP_001382302.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395373.1Link to Protein Sequence:NP_001382302.1Re-query CCDS DB by Nucleotide ID:NM_001395373Re-query CCDS DB by Protein ID:NP_001382302Link to BLAST:NP_001382302.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001382302.1 638 H3BPF8 638 100% 0 0

Chromosomal Locations for CCDS 91964.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 23354810 23354893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23356591 23356710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23357296 23357355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23357539 23357619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23358472 23358510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23358784 23358831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23358920 23359004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23359100 23359209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23360229 23360318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23360425 23360532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23360728 23360815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23361221 23361456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23361724 23361792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23363165 23363240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23363678 23363769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23364343 23364443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23364526 23364623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23364719 23364874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 23364959 23365134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1917 nt):
ATGTGGCCCCAAGCCCGCCTCCCTCCCCACCCTGCGATGGCAGAAGAAACTCGACAAAGTAAATTGGCAG
CAGCCAAGAGAAAGTTAAAAGAATATTGGCAGAGAAACAGCCCTGGTGTTCCAGCAGGAGCCAAGAGGAA
CAGGAAAACAAATGGCAGCATCCATGAGACAGCCACTTCTGGTGGTTGCCACTCACCTGGAGATTCAGCA
ACAGGTATCCACGGGGAGAGCCCTACATCATCTGCTACCCTGAAGGATCTGGAGAGCCCGTGCCAAGAAC
TAGCAGTAGTCCCAGACTCGAGGTCCGTAAAAGTCAGTCAACTGAAGAACACCATCAAATCTTTGAAACA
ACAGAAGAAACAAGTGGTACATCAGCTGGAAGAAGAAAAGAAAGCAAACAACGAGAAACAGAAAGCCGAA
AGGGAGCTAGAGGTTCAAATCCAGAGATTGAACATACAGAAAGGGAAACTAAATACGGACCTGTACCACA
CGAAACGTTCTCTCAGATACTTTGAAGAAGAGTCCAAGGATCTGGCCGTCCGTCTGCAACATTCATTGCA
GCGTAAAGGAGAGTTAGAGCGGGCTCTCTCTGCTGTCACCGCCACACAGAAGAAGAAGGCGGAGAGGCAG
TTCTCCAGCCGCAGTAAAGCACGTACGGAGTGGAAGTTAGAGCAGTCCATGCGGGAGCAGGCACTGCTGA
AAGCGCAGCTGACACAGTTGAAGGAGTCACTTAAAGAAGTCCAGCTAGAGAGGGATGAATATGCTGAACA
TCTAAAAGGAGAGAGGGCCCGGTGGCAGCAGAGGATGAGAAAAATGTCGCAGGAGGTTTGCTCGTTGAAG
AAGGAGAAGAAGCATGATAAATATCGGGTAGAGACGCTGGAGAGGAGCTTGTCCAAACTCAAAAACCAGA
TGGCTGAACCTCTGCCCCCGGAGCCCCCAGCAGTGCCCTCTGAGGCGGAGCTGCAGCACCTGAGGAAGGA
ACTAGAGAGAGTGGCAGGAGCGCTCCAGGCCCAGGTGGAGTACAATCAGCGCATAAGTCTCCTGAATGAG
GGGCAAAAGGAGAGGCTTCGGGAGCAGCAGGAGAGGCTTCCAGAGCAGGAGGAGAGGCTTCAGCAGCTGG
CCGAGCCACAGAACAGCTTCAAGGAGCTGAACAATGAGAACAAGAGCGTACTACAGTTGGAGCAGCAAGT
AAAGGAGCTGCAGGAGAAGCTAGGCAAGGAGCGTCTGGAAGCTGCCAGCCAGCAGAAACAGCAGCTAACG
GCCCAGTTGAGCCTCATGGCTCTCCCTGGGGAAGGAGATGGAGGAGGACATCTGGACAGTGAGGGGGAGG
AGGCACCTCGGCCCATTCCTAGCATCCCACAGGACCTGGAGAGCAGGGAGGCCATGAGCAGCTTTATGGA
CCACCTGGAGGAGAAGGCAGACCTGAGTGAGCTGGTGAAGAAACAAGAACTTCGCTTCATTCAATACTGG
CAAGAGAGATGCCATCAGAAAATCCATCACCTTTTATCAGAACCAGGGGGCCGTGCCAAAGATGCGGCAC
TGGGAGGAGGACACCATCAGGCTGGAGCTCAGGGAGGAGATGAAGATGAAGCTGCTGGAGCTGCAGCAGA
TGGTATTGCGGCTTACAGCAACTACAACAATGGGCACAGAAAATTCCTGGCCGCTGCCCACAACCCTGCT
GATGAGCCCGGTCCAGGAGCCCCAGCCCCCCAGGAGCTTGGGGCTGCAGACAAGCATGGTGATCTTTGTG
AGGTGAGCCTCACCTCCTCTGCCCAAGGAGAGGCCAGGGAGGATCCTCTCCTTGACAAGCCTACTGCACA
GCCGATCGTGCAGGACCACCAGGAGCACCCAGGCTTGGGCAACAACTGCTGTGTGCCATTCTTTTGCTGG
GCTTGGCTGCCAAGAAGAAGGAGATAA

Translation (638 aa):
MWPQARLPPHPAMAEETRQSKLAAAKRKLKEYWQRNSPGVPAGAKRNRKTNGSIHETATSGGCHSPGDSA
TGIHGESPTSSATLKDLESPCQELAVVPDSRSVKVSQLKNTIKSLKQQKKQVVHQLEEEKKANNEKQKAE
RELEVQIQRLNIQKGKLNTDLYHTKRSLRYFEEESKDLAVRLQHSLQRKGELERALSAVTATQKKKAERQ
FSSRSKARTEWKLEQSMREQALLKAQLTQLKESLKEVQLERDEYAEHLKGERARWQQRMRKMSQEVCSLK
KEKKHDKYRVETLERSLSKLKNQMAEPLPPEPPAVPSEAELQHLRKELERVAGALQAQVEYNQRISLLNE
GQKERLREQQERLPEQEERLQQLAEPQNSFKELNNENKSVLQLEQQVKELQEKLGKERLEAASQQKQQLT
AQLSLMALPGEGDGGGHLDSEGEEAPRPIPSIPQDLESREAMSSFMDHLEEKADLSELVKKQELRFIQYW
QERCHQKIHHLLSEPGGRAKDAALGGGHHQAGAQGGDEDEAAGAAADGIAAYSNYNNGHRKFLAAAHNPA
DEPGPGAPAPQELGAADKHGDLCEVSLTSSAQGEAREDPLLDKPTAQPIVQDHQEHPGLGNNCCVPFFCW
AWLPRRRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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