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Report for CCDS12843.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12843.1 Public Homo sapiens 19 ZNF649 24 110 108 CCDS HistoryNCBI Gene:65251Re-query CCDS DB by CCDS ID:12843.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12843.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354957.8 ENSP00000347043.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354957.8Link to Ensembl Protein Viewer:ENSP00000347043.2Re-query CCDS DB by Nucleotide ID:ENST00000354957Re-query CCDS DB by Protein ID:ENSP00000347043
Original member Current member NCBI NM_023074.4 NP_075562.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_023074.4Link to Protein Sequence:NP_075562.2Re-query CCDS DB by Nucleotide ID:NM_023074Re-query CCDS DB by Protein ID:NP_075562Link to BLAST:NP_075562.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075562.2 505 Q9BS31 505 100% 0 0

Chromosomal Locations for CCDS 12843.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51890618 51891897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51896472 51896567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51896852 51896978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51900093 51900107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1518 nt):
ATGACAAAGGCCCAGGAATCACTGACCCTGGAGGATGTGGCTGTGGACTTCACCTGGGAGGAGTGGCAGT
TC
CTGAGCCCTGCTCAGAAGGACCTGTACCGGGATGTGATGTTGGAGAACTACAGCAACCTTGTGTCAGT
G
GGGTATCAAGCCGGCAAACCTGATGCCCTCACCAAGTTGGAACAAGGAGAACCACTATGGACACTAGAA
GAT
GAAATCCACAGTCCAGCCCACCCAGAAATTGAGAAAGCTGATGATCATCTGCAGCAGCCCTTGCAAA
AC
CAAAAAATACTGAAGAGGACGGGACAACGCTATGAACACGGAAGAACTTTGAAATCATATTTAGGTTT
A
ACCAACCAGAGCAGAAGATACAACAGAAAGGAGCCTGCTGAGTTTAATGGAGATGGAGCTTTTCTCCAT
GAT
AATCATGAACAAATGCCTACGGAAATTGAATTCCCTGAAAGTAGAAAACCCATCAGCACCAAGTCAC
AA
TTCCTTAAACATCAGCAAACACACAACATAGAGAAAGCCCATGAATGCACTGACTGTGGGAAAGCTTT
C
CTCAAGAAGTCTCAGCTCACTGAGCATAAGAGAATTCATACAGGAAAGAAACCCCACGTGTGTAGCTTG
TGT
GGGAAAGCCTTCTACAAGAAGTACAGGCTCACTGAACACGAGAGAGCTCACAGAGGAGAGAAACCCC
AC
GGGTGTAGCTTGTGTGGGAAAGCCTTCTACAAGAGGTACAGGCTCACTGAACACGAGAGAGCTCACAA
A
GGAGAGAAACCATACGGGTGCAGTGAATGTGGGAAAGCCTTCCCCAGGAAATCTGAGCTTACTGAACAT
CAA
AGGATTCACACGGGAATTAAGCCCCATCAATGCAGCGAATGTGGGAGAGCTTTCTCCAGAAAATCAC
TA
CTCGTTGTACATCAGCGAACTCATACAGGAGAGAAGCCTCATACATGCAGTGAATGTGGAAAAGGCTT
C
ATTCAGAAGGGCAATCTCAACATACATCAACGAACTCACACTGGAGAGAAACCTTATGGATGCATTGAC
TGT
GGCAAGGCCTTCAGCCAGAAGTCTTGCCTTGTAGCACATCAGAGATATCATACAGGAAAGACTCCCT
TT
GTATGTCCTGAATGTGGGCAACCCTGTTCACAGAAGTCAGGACTCATTAGACATCAGAAAATTCACTC
A
GGAGAGAAACCCTATAAATGCAGTGACTGTGGGAAAGCCTTCCTTACAAAGACAATGCTCATTGTACAT
CAC
AGAACTCACACGGGAGAGAGACCCTATGGCTGTGATGAGTGTGAGAAAGCTTACTTCTATATGTCTT
GC
CTTGTTAAACATAAGAGAATACACTCAAGGGAGAAACGGGGGGATTCAGTGAAGGTGGAAAATCCTTC
C
ACAGCAAGTCACAGCTTAAGTCCTAGTGAACATGTGCAGGGGAAAAGCCCTGTTAATATGGTAACTGTG
GCA
ATGGTGGCAGGGCAGTGTGAGTTTGCCCACATCCTGCATTCATGA


Translation (505 aa):
MTKAQESLTLEDVAVDFTWEEWQFLSPAQKDLYRDVMLENYSNLVSVGYQAGKPDALTKLEQGEPLWTLE
D
EIHSPAHP
EIEKADDHLQQPLQNQKILKRTGQRYEHGRTLKSYLGLTNQSRRYNRKEPAEFNGDGAFLH
D
NHEQMPTEIEFPESRKPISTKSQFLKHQQTHNIEKAHECTDCGKAFLKKSQLTEHKRIHTGKKPHVCSL
C
GKAFYKKYRLTEHERAHRGEKPHGCSLCGKAFYKRYRLTEHERAHKGEKPYGCSECGKAFPRKSELTEH
Q
RIHTGIKPHQCSECGRAFSRKSLLVVHQRTHTGEKPHTCSECGKGFIQKGNLNIHQRTHTGEKPYGCID
C
GKAFSQKSCLVAHQRYHTGKTPFVCPECGQPCSQKSGLIRHQKIHSGEKPYKCSDCGKAFLTKTMLIVH
H
RTHTGERPYGCDECEKAYFYMSCLVKHKRIHSREKRGDSVKVENPSTASHSLSPSEHVQGKSPVNMVTV
A
MVAGQCEFAHILHS




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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