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Report for CCDS33270.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33270.1 Public Homo sapiens 2 SOWAHC 24 110 108 CCDS HistoryNCBI Gene:65124Re-query CCDS DB by CCDS ID:33270.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33270.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356454.5 ENSP00000365830.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356454.5Link to Ensembl Protein Viewer:ENSP00000365830.2Re-query CCDS DB by Nucleotide ID:ENST00000356454Re-query CCDS DB by Protein ID:ENSP00000365830
Original member Current member NCBI NM_023016.4 NP_075392.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_023016.4Link to Protein Sequence:NP_075392.2Re-query CCDS DB by Nucleotide ID:NM_023016Re-query CCDS DB by Protein ID:NP_075392Link to BLAST:NP_075392.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075392.2 525 Q53LP3 525 100% 0 0

Chromosomal Locations for CCDS 33270.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 109614490 109616067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1578 nt):
ATGGAGGGGCCGGCAGAGTGGGGCCCCGAGGCGGCGCTGGGCCCCGAGGCGGTGCTGCGCTTCCTGGCGG
AGCGCGGGGGCCGGGCCCTGCACGCCGAGCTGGTGCAGCACTTCAGGGGCGCCCTAGGCGGCGAACCGGA
GCAGCGCGCCCGCGCCCGCGCGCACTTCAAGGAGCTGGTGAACGCCGTGGCCACTGTGCGCGTCGATCCC
GCCGACGGCGCCAAGTACGTGCACCTCAAGAAGAGGTTCTGTGAAGGGCCGTCCGAGCCCTCCGGGGACC
CGCCGCGAATCCAGGTGACCGCCGAGCCCGAGGCCCCCGACGGCCCTGCCGGGCCCGAGGCGCGCGATCG
GCTCCCCGACGCGGCGGCCCCGGAGTCGCTCCCTGGACAGGGCCGCGAGCTGGGCGAGGGAGAGCCCCCC
GCCCCCGCGCACTGGCCGCCCCTGAGCGCCGGGGCTCGCAGGAAGAACTCGCGGCGCGACGTGCAGCCCC
TACCGCGGACTCCAGCCCCGGGGCCCAGCGAGGACCTGGAGCTCCCGCCACATGGCTGCGAGGAGGCGGA
CAGGGGCAGCTCCCTTGTGGGGGCTACCGCACAGAGGCCGGCCCGCCAGAACCTCCGTGACCTGGTGATG
GGCAGCTCCCCGCAGCTGAAGAGGAGCGTGTGTCCCGGGGGCAGCAGCCCGGGCAGCTCCTCCGGGGGAG
GACGCGGCAGAGGCGGGGGCGACTCAGACAGCGCATCGGTGGCCTCGTCGTCCGCGGAGGAGGAGAGCAG
CGGCGGAGGCTCCGTGACGCTGGACCCCCTGGAGCACGCGTGGATGCTCTCTGCCTCCGATGGCAAGTGG
GACAGCCTGGAGGGCTTGCTCACCTGCGAGCCCGGCCTGCTGGTCAAGCGGGACTTCATTACCGGCTTCA
CTTGCCTGCACTGGGCCGCCAAGCACGGCAGGCAGGAGCTTCTGGCCATGCTAGTCAACTTCGCCAACAA
ACACCAGCTGCCGGTGAACATCGACGCCAGGACGAGCGGGGGTTACACCGCCCTGCACTTGGCAGCCATG
CACGGCCACGTGGAGGTGGTGAAGCTGCTGGTGGGGGCCTACGACGCCGATGTGGACATCAGGGACTACA
GTGGGAAAAAGGCCTCCCAGTACCTGAGTCGGAGCATCGCCGAGGAGATCAAGAACCTGGTGGGAGCCCT
GGACGAGGGTGACGGGGAAAGCGCCGCGGGTAGCGGCGGCGGGCGCTGGAGGCTTTCAAAGGTGCTTCCC
TCGCATCTCATCACCTACAAACTCTCACACGCCCTAGAAGATGGAGGGGACCATCACCACCATCACCACT
CGGCTGAGGGGTGGGTCGGAGGCAAAGCCAAGGATCCAGGGCGCAAAGCCTCGGGCAGCTCTAGTGGACG
TATAAAACCCAGACTCAACAAAATCCGATTCAGAACCCAGATCGTCCACACCACACCCTCTTTCAGGGAC
CCAGAGCAGCCGCTGGAGGGCAGGGGGGAGGAGGGAGTGGGGGAGGAACGACCTGTTAAAGGCCACTCGC
CCTTCACATTGAGACCAAAGTCCAATGTATTTGGGTAA

Translation (525 aa):
MEGPAEWGPEAALGPEAVLRFLAERGGRALHAELVQHFRGALGGEPEQRARARAHFKELVNAVATVRVDP
ADGAKYVHLKKRFCEGPSEPSGDPPRIQVTAEPEAPDGPAGPEARDRLPDAAAPESLPGQGRELGEGEPP
APAHWPPLSAGARRKNSRRDVQPLPRTPAPGPSEDLELPPHGCEEADRGSSLVGATAQRPARQNLRDLVM
GSSPQLKRSVCPGGSSPGSSSGGGRGRGGGDSDSASVASSSAEEESSGGGSVTLDPLEHAWMLSASDGKW
DSLEGLLTCEPGLLVKRDFITGFTCLHWAAKHGRQELLAMLVNFANKHQLPVNIDARTSGGYTALHLAAM
HGHVEVVKLLVGAYDADVDIRDYSGKKASQYLSRSIAEEIKNLVGALDEGDGESAAGSGGGRWRLSKVLP
SHLITYKLSHALEDGGDHHHHHHSAEGWVGGKAKDPGRKASGSSSGRIKPRLNKIRFRTQIVHTTPSFRD
PEQPLEGRGEEGVGEERPVKGHSPFTLRPKSNVFG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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