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Report for CCDS34287.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34287.1 Public Homo sapiens 5 RANBP17 24 110 108 CCDS HistoryNCBI Gene:64901Re-query CCDS DB by CCDS ID:34287.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34287.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523189.6 ENSP00000427975.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000523189.6Link to Ensembl Protein Viewer:ENSP00000427975.1Re-query CCDS DB by Nucleotide ID:ENST00000523189Re-query CCDS DB by Protein ID:ENSP00000427975
Original member Current member NCBI NM_022897.5 NP_075048.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022897.5Link to Protein Sequence:NP_075048.1Re-query CCDS DB by Nucleotide ID:NM_022897Re-query CCDS DB by Protein ID:NP_075048Link to BLAST:NP_075048.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075048.1 1088 Q9H2T7-1 1088 100% 0 0

Chromosomal Locations for CCDS 34287.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 170862034 170862051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170878097 170878243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170881806 170881896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170892387 170892553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170896050 170896115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170909661 170909765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170910969 170911134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170914167 170914240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170916465 170916584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170918713 170918859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170919441 170919613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170924357 170924550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170953597 170953702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 170968242 170968377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171170130 171170203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171171206 171171286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171183167 171183230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171183322 171183430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171199670 171199773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171205524 171205612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171213631 171213738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171221758 171221840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171240928 171241142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171242682 171242820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171265681 171265847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171293883 171293981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171295887 171296014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 171298762 171298858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3267 nt):
ATGGCGCTGCACTTCCAGAGTTTGGCTGAATTGGAAGTGTTATGTACTCATCTCTACATAGGGACTGATC
TTACACAAAGAATAGAGGCTGAGAAAGCACTCTTGGAACTTATTGACAGTCCAGAATGTCTCAGCAAGTG
TCAACTTTTATTAGAACAAGGAACAACATCCTATGCTCAGCTCCTTGCAGCAACATGTCTTTCAAAACTT
GTCAGCCGAGTCAGTCCTTTACCTGTTGAGCAGAGGATGGACATCAGAAACTACATTCTGAATTACGTGG
CATCACAGCCCAAGCTGGCTCCCTTTGTCATCCAAGCTCTTATTCAAGTCATTGCTAAAATCACTAAGTT
GGGGTGGTTTGAGGTTCAGAAAGACCAATTTGTCTTCAGAGAAATTATTGCTGATGTGAAGAAGTTTCTC
CAGGGTACTGTGGAACACTGCATAATAGGAGTAATAATCCTTTCTGAATTGACTCAGGAAATGAACCTGG
TTGATTATTCTAGACCTTCAGCAAAACACAGGAAAATAGCTACCTCATTTCGTGATACTTCTCTCAAAGA
CGTTTTAGTGCTAGCATGCTCTCTTTTAAAAGAGGTGTTTGCCAAACCTTTAAATCTTCAGGATCAATGT
CAGCAAAATCTGGTAATGCAGGTCTTGAAACTGGTCCTTAACTGCCTTAACTTTGACTTCATTGGCAGTT
CAGCAGATGAATCTGCAGATGATCTTTGCACGGTGCAGATTCCAACAACTTGGAGAACAATTTTCCTGGA
ACCAGAAACATTGGATCTTTTCTTCAATTTGTATCATTCACTTCCACCACTACTATCTCAGTTAGCACTT
TCATGTTTAGTTCAGTTTGCTTCGACAAGAAGGTCCTTATTTAACAGTCCTGAACGTGCCAAGTACCTTG
GTAATTTAATTAAGGGAGTAAAAAGGATACTTGAAAACCCTCAGGGTTTGTCTGATCCAGGTAATTATCA
TGAATTTTGTCGATTTTTGGCTCGTTTAAAGACAAATTATCAGCTGGGAGAATTAGTTATGGTGAAGGAA
TATCCTGAAGTTATTAGATTGATTGCTAATTTTACCATTACTAGCCTACAGCACTGGGAATTTGCTCCTA
ACAGTGTTCATTATTTATTAACTCTGTGGCAAAGGATGGTAGCATCTGTTCCTTTTGTGAAATCAACTGA
ACCCCACCTATTAGACACTTATGCACCAGAAATCACGAAGGCCTTTATCACTTCTCGGTTGGACTCTGTT
GCCATAGTTGTGAGAGATCACTTAGATGATCCACTGGATGATACTGCCACTGTGTTTCAGCAGTTGGAGC
AGTTGTGCACGGTCAGCAGATGTGAATATGAAAAGACATGTGCTCTTCTTGTGCAGTTATTCGACCAAAA
TGCACAGAATTACCAAAAACTTCTGCATCCATATTCTGGTGTAACTGTGGACATCACCATTCAGGAAGGA
CGTCTTGCATGGCTGGTATACTTAGTTGGGACAGTTGTAGGAGGAAGATTAACATATACCAGTACAGATG
AGCATGATGCTATGGATGGAGAATTATCCTGTCGAGTTTTTCAGCTTATATCTTTAATGGATACCGGATT
GCCTCGATGTTGTAATGAGAAAATAGAGCTTGCAATTCTGTGGTTCTTGGATCAGTTTCGTAAAACATAT
GTTGGTGATCAACTTCAAAGAACCTCAAAGGTATATGCTCGTATGTCAGAAGTCTTAGGAATAACAGATG
ACAACCACGTTCTAGAGACGTTCATGACAAAAATTGTTACAAACCTTAAATACTGGGGAAGATATGAGCC
TGTAATTTCAAGGACTCTTCAGTTCCTAAATGACCTTTCTGTTGGTTATATCCTTTTAAAAAAACTTGTG
AAGATAGATGCTGTGAAATTCATGCTAAAAAACCACACGAGTGAACACTTCCCTTTTCTTGGCATCAGTG
ACAATCATAGTCTCAGCGACTTCAGGTGTCGAACAACCTTCTACACAGCGCTCACTCGCCTTCTGATGGT
AGATCTGGGTGAAGATGAGGATGAATTTGAGAATTTCATGCTGCCTCTTACAGTTGCTTTTGAAACAGTA
TTACAAATATTCAACAACAACTTTAAACAAGAAGATGTAAAGCGTATGTTGATCGGGCTGGCAAGAGATC
TTCGAGGGATTGCCTTTGCACTGAACACAAAGACCAGCTACACCATGCTGTTTGACTGGATGTACCCAAC
GTACCTTCCCCTTCTTCAGAATGCTGTTGAACGGTGGTATGGAGAGCCAACATGTACAACTCCCATCTTG
AAACTTATGGCAGAACTTATGCAAAACAGATCCCAGCGTTTGAATTTTGATGTATCATCTCCTAATGGAA
TTCTTCTCTTCAGAGAAGCTAGTAAAATGGTTTGCACTTATGGTAATCAGATCCTGTCCCTTGGGAGCCT
CTCAAAAGATCAGATTTATCCAATGAAACTCAAGGGCATCTCCATCTGCTATTCAGCTCTCAAGTCTGCC
TTGTGTGGAAATTATGTCAGCTTTGGCGTCTTCAAGTTGTATGGGGACAACCATTTTGACAATGTACTCC
AGGCTTTTGTCAAAATGCTGCTGTCAGTGTCCCACAGTGACTTGCTACAATACCGGAAACTGAGCCAGTC
TTATTATCCACTCCTGGAATGTCTCACTCAGGACCATATGAGCTTCATCATCAACTTAGAGCCTCCTGTA
CTCATGTATGTTCTCACATCTATCTCAGAGGGACTCACTACTCTTGATACAGTTGTCTCCTCCAGCTGCT
GTACCAGTTTAGACTACATCGTCACCTACCTCTTCAAGCACATAGCAAAAGAGGGCAAGAAGCCACTTCG
ATGCAGAGAGGCTACCCAGGCTGGTCAGAGACTATTACATTTTATGCAGCAAAACCCAGATGTCCTGCAG
CAGATGATGTCTGTCCTCATGAACACCATTGTCTTTGAAGACTGTCGGAACCAGTGGTCAGTATCCAGGC
CTCTCCTGGGGCTCATCCTGCTCAATGAGAAGTATTTCAGTGAACTGAGAGCAAGTTTGATAAACAGCCA
GCCCCTCCCCAAGCAGGAGGTCCTTGCCCAGTGCTTCAGAAACCTAATGGAAGGAGTGGAGCAGAACCTG
TCCGTCAAGAACAGAGACAGGTTCACCCAAAATCTGTCTGTATTCAGAAGAGATGTGGCAGAGGCGTTGC
GCAGTGATGGCAACACTGAACCATGCAGTCTCGACATGATGAGCTGA

Translation (1088 aa):
MALHFQSLAELEVLCTHLYIGTDLTQRIEAEKALLELIDSPECLSKCQLLLEQGTTSYAQLLAATCLSKL
VSRVSPLPVEQRMDIRNYILNYVASQPKLAPFVIQALIQVIAKITKLGWFEVQKDQFVFREIIADVKKFL
QGTVEHCIIGVIILSELTQEMNLVDYSRPSAKHRKIATSFRDTSLKDVLVLACSLLKEVFAKPLNLQDQC
QQNLVMQVLKLVLNCLNFDFIGSSADESADDLCTVQIPTTWRTIFLEPETLDLFFNLYHSLPPLLSQLAL
SCLVQFASTRRSLFNSPERAKYLGNLIKGVKRILENPQGLSDPGNYHEFCRFLARLKTNYQLGELVMVKE
YPEVIRLIANFTITSLQHWEFAPNSVHYLLTLWQRMVASVPFVKSTEPHLLDTYAPEITKAFITSRLDSV
AIVVRDHLDDPLDDTATVFQQLEQLCTVSRCEYEKTCALLVQLFDQNAQNYQKLLHPYSGVTVDITIQEG
RLAWLVYLVGTVVGGRLTYTSTDEHDAMDGELSCRVFQLISLMDTGLPRCCNEKIELAILWFLDQFRKTY
VGDQLQRTSKVYARMSEVLGITDDNHVLETFMTKIVTNLKYWGRYEPVISRTLQFLNDLSVGYILLKKLV
KIDAVKFMLKNHTSEHFPFLGISDNHSLSDFRCRTTFYTALTRLLMVDLGEDEDEFENFMLPLTVAFETV
LQIFNNNFKQEDVKRMLIGLARDLRGIAFALNTKTSYTMLFDWMYPTYLPLLQNAVERWYGEPTCTTPIL
KLMAELMQNRSQRLNFDVSSPNGILLFREASKMVCTYGNQILSLGSLSKDQIYPMKLKGISICYSALKSA
LCGNYVSFGVFKLYGDNHFDNVLQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFIINLEPPV
LMYVLTSISEGLTTLDTVVSSSCCTSLDYIVTYLFKHIAKEGKKPLRCREATQAGQRLLHFMQQNPDVLQ
QMMSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKYFSELRASLINSQPLPKQEVLAQCFRNLMEGVEQNL
SVKNRDRFTQNLSVFRRDVAEALRSDGNTEPCSLDMMS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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