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Report for CCDS73340.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73340.1 Public Homo sapiens 11 MYEOV 24 110 108 CCDS HistoryNCBI Gene:26579Re-query CCDS DB by CCDS ID:73340.1Re-query CCDS DB by GeneID:26579See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73340.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535407.1 ENSP00000438100.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535407.1Link to Ensembl Protein Viewer:ENSP00000438100.1Re-query CCDS DB by Nucleotide ID:ENST00000535407Re-query CCDS DB by Protein ID:ENSP00000438100
Original member Current member NCBI NM_001293294.2 NP_001280223.1 Accepted alive Link to Nucleotide Sequence:NM_001293294.2Link to Protein Sequence:NP_001280223.1Re-query CCDS DB by Nucleotide ID:NM_001293294Re-query CCDS DB by Protein ID:NP_001280223Link to BLAST:NP_001280223.1
Original member Current member NCBI NM_001293296.2 NP_001280225.1 Accepted alive Link to Nucleotide Sequence:NM_001293296.2Link to Protein Sequence:NP_001280225.1Re-query CCDS DB by Nucleotide ID:NM_001293296Re-query CCDS DB by Protein ID:NP_001280225Link to BLAST:NP_001280225.1
Original member Current member NCBI NM_001300923.2 NP_001287852.1 Accepted alive Link to Nucleotide Sequence:NM_001300923.2Link to Protein Sequence:NP_001287852.1Re-query CCDS DB by Nucleotide ID:NM_001300923Re-query CCDS DB by Protein ID:NP_001287852Link to BLAST:NP_001287852.1
Original member Current member NCBI NM_001300924.2 NP_001287853.1 Accepted alive Link to Nucleotide Sequence:NM_001300924.2Link to Protein Sequence:NP_001287853.1Re-query CCDS DB by Nucleotide ID:NM_001300924Re-query CCDS DB by Protein ID:NP_001287853Link to BLAST:NP_001287853.1

Chromosomal Locations for CCDS 73340.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 69295625 69296392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (768 nt):
ATGTTCACCCGGCAGGCTGGACACTTCGTGGAGGGCTCCAAAGCCGGCAGATCCCGGGGCCGCCTCTGTC
TCTCCCAGGCCCTGCGTGTTGCGGTGAGAGGAGCATTTGTGTCTCTGTGGTTTGCTGCTGGAGCTGGTGA
CCGGGAGAGAAACAAGGGAGACAAGGGTGCCCAGACAGGTGCGGGGCTCAGCCAGGAGGCAGAAGACGTG
GACGTGTCCCGGGCCAGGAGGGTCACAGATGCACCACAAGGCACTCTGTGTGGCACTGGGAACAGGAATT
CTGGGAGTCAGTCTGCAAGGGTGGTGGGCGTTGCTCACCTGGGAGAAGCCTTTAGAGTGGGCGTTGAGCA
GGCCATTAGCTCGTGCCCTGAGGAGGTGCATGGGCGGCATGGGCTCTCCATGGAAATTATGTGGGCGCGA
ATGGATGTGGCTCTGCGCTCACCTGGGCGAGGACTTCTGGCCGGTGCCGGGGCACTCTGCATGACCCTGG
CAGAATCGAGCTGCCCTGACTATGAAAGGGGAAGAAGAGCATGCCTGACCCTCCACCGGCACCCCACCCC
TCACTGCTCCACCTGGGGCCTGCCTCTGCGGGTGGCTGGGTCCTGGCTGACTGTTGTGACTGTTGAGGCC
CTGGGGGGGTGGCGCATGGGAGTTAGGAGGACTGGCCAGGTGGGGCCCACTATGCACCCACCCCCAGTGT
CAGGTGCTTCTCCTCTCCTCCTCCACCACCTCCTCCTCCTCCTCCTCATCATCATCCTCACTTGTTGA

Translation (255 aa):
MFTRQAGHFVEGSKAGRSRGRLCLSQALRVAVRGAFVSLWFAAGAGDRERNKGDKGAQTGAGLSQEAEDV
DVSRARRVTDAPQGTLCGTGNRNSGSQSARVVGVAHLGEAFRVGVEQAISSCPEEVHGRHGLSMEIMWAR
MDVALRSPGRGLLAGAGALCMTLAESSCPDYERGRRACLTLHRHPTPHCSTWGLPLRVAGSWLTVVTVEA
LGGWRMGVRRTGQVGPTMHPPPVSGASPLLLHHLLLLLLIIILTC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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