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Report for CCDS45603.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45603.1 Public Homo sapiens 17 SLC35G6 24 110 108 CCDS HistoryNCBI Gene:643664Re-query CCDS DB by CCDS ID:45603.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45603.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000412468.4 ENSP00000396523.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000412468.4Link to Ensembl Protein Viewer:ENSP00000396523.2Re-query CCDS DB by Nucleotide ID:ENST00000412468Re-query CCDS DB by Protein ID:ENSP00000396523
Original member Current member NCBI NM_001102614.2 NP_001096084.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001102614.2Link to Protein Sequence:NP_001096084.1Re-query CCDS DB by Nucleotide ID:NM_001102614Re-query CCDS DB by Protein ID:NP_001096084Link to BLAST:NP_001096084.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001096084.1 338 P0C7Q6 338 100% 0 0

Chromosomal Locations for CCDS 45603.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7481517 7481519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7481988 7483001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1017 nt):
ATGGCTGGCAGTCACCCCTACTTGAACCCGCCTGACTCCACACACCCATCGCCGCCCTCCGCTCCACCCA
GCCTCCGCTGGCACCAGTGCTGCCAGCCCTCTGATGCCACCAATGGCCTGCTGGTGGCCCTGCTGGGTGG
GGGCCTGCCTGCTGGCTTCGTGGGCCCCCTTTCTCATATGGCTTACCAGGCTTCCAACCTGCCCTCGCTG
GAGCTGCTCATCTGTCGATGCCTCTTCCACCTCCCTATTGCCCTGCTACTTAAACTGCGTGGCGACCCCC
TTCTGGGACCTCCTGACATCCGAGGCCGGGCCTACTTCTATGCCCTGCTCAACGTCCTCAGCATTGGATG
TGCCTACAGTGCGGTTCAGGTGGTGCCCGCTGGCAACGCTGCCACTGTTCGCAAAGGTTCTTCCACCGTC
TGCTCCGCCGTCCTCACCCTCTGCCTTGAGAGCCAGGGTCTCAGTGGCTACGACTGGTGTGGACTGTTGG
GCAGCATCCTAGGACTAATCATCATTGTGGGACCTGGACTCTGGACACTACAGGAGGGGATCACGGGTGT
CTACACCGCCCTGGGCTATGGGCAGGCTTTCGTGGGAGGACTGGCGCTGTCCCTGGGGCTTCTGGTCTAT
CGTTCTCTGCACTTTCCCTCCTGCCTCCCAACAGTGGCCTTCCTATCTGGCTTGGTGGGGCTGCTGGGCT
CTGTGCCAGGCCTCTTTGTGCTGCAGCCCCCCGTGTTGCCCAGTGATCTCCCGAGTTGGAGTTGTGTGGG
GGCAGTGGGGATCCTCGCCTTGGTCTCCTTCACATGTGTGAGCTATGCGGTCACCAAGGCCCACCCTGCC
CTGGTGTGCGCTGTCCTGCATTCCGAGGTGGTGGTGGCCCTTATACTGCAGTATTATATGCTCCATGAGA
CTGTGGCACCTTCTGACATCGTGGGGGCAGGGGTTGTGCTGGGCAGCATTGCCATCATCACAGCCTGGAA
CCTCAGCTGTGAGAGGGAAGGGAAGGTGGAGGAGTGA

Translation (338 aa):
MAGSHPYLNPPDSTHPSPPSAPPSLRWHQCCQPSDATNGLLVALLGGGLPAGFVGPLSHMAYQASNLPSL
ELLICRCLFHLPIALLLKLRGDPLLGPPDIRGRAYFYALLNVLSIGCAYSAVQVVPAGNAATVRKGSSTV
CSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGPGLWTLQEGITGVYTALGYGQAFVGGLALSLGLLVY
RSLHFPSCLPTVAFLSGLVGLLGSVPGLFVLQPPVLPSDLPSWSCVGAVGILALVSFTCVSYAVTKAHPA
LVCAVLHSEVVVALILQYYMLHETVAPSDIVGAGVVLGSIAIITAWNLSCEREGKVEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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