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Report for CCDS9572.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9572.1 Public Homo sapiens 14 ABHD4 24 110 108 CCDS HistoryNCBI Gene:63874Re-query CCDS DB by CCDS ID:9572.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9572.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000428304.7 ENSP00000414558.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000428304.7Link to Ensembl Protein Viewer:ENSP00000414558.2Re-query CCDS DB by Nucleotide ID:ENST00000428304Re-query CCDS DB by Protein ID:ENSP00000414558
Original member Current member NCBI NM_022060.3 NP_071343.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022060.3Link to Protein Sequence:NP_071343.2Re-query CCDS DB by Nucleotide ID:NM_022060Re-query CCDS DB by Protein ID:NP_071343Link to BLAST:NP_071343.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071343.2 342 Q8TB40-1 342 100% 0 0

Chromosomal Locations for CCDS 9572.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 22598307 22598329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22601667 22601755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22603390 22603762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22603925 22604079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22606422 22606533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22609724 22609910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22610859 22610948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1029 nt):
ATGGCCGATGATCTGGAGCAGCAGTCTCAAGGCTGGCTGAGTAGCTGGCTGCCCACGTGGCGCCCCACTT
CCATGTCTCAGCTGAAGAATGTGGAAGCCAGGATCCTCCAGTGTCTCCAGAATAAGTTCCTGGCCAGATA
TGTATCCCTCCCAAACCAGAATAAGATCTGGACGGTGACTGTGAGCCCCGAGCAAAACGACCGCACCCCC
TTGGTGATGGTGCATGGTTTTGGGGGCGGCGTGGGTCTCTGGATCCTCAACATGGACTCACTGAGTGCCC
GCCGCACACTGCACACCTTCGATCTGCTTGGCTTCGGGCGAAGCTCAAGGCCAGCATTCCCAAGGGACCC
GGAGGGGGCTGAGGATGAGTTTGTGACATCGATAGAGACATGGCGGGAGACCATGGGGATCCCCAGCATG
ATCCTCCTGGGGCACAGTTTGGGAGGATTCCTGGCCACTTCTTACTCAATCAAGTACCCTGATAGAGTTA
AACACCTCATCCTGGTGGACCCATGGGGCTTTCCCCTCCGACCAACTAACCCCAGTGAGATCCGTGCACC
CCCAGCCTGGGTCAAAGCCGTGGCATCTGTCCTAGGACGTTCCAATCCATTGGCTGTTCTTCGAGTAGCT
GGGCCCTGGGGGCCTGGTCTGGTGCAGCGATTCCGGCCGGACTTCAAACGCAAGTTTGCAGACTTCTTTG
AAGATGATACCATATCAGAGTATATTTACCACTGCAACGCACAGAATCCCAGTGGTGAGACAGCATTCAA
AGCCATGATGGAGTCCTTTGGCTGGGCCCGGCGCCCTATGCTGGAGCGAATTCACTTGATTCGAAAAGAT
GTGCCTATCACTATGATCTACGGGTCCGACACCTGGATAGATACCAGTACGGGAAAAAAGGTGAAGATGC
AGCGGCCGGATTCCTATGTCCGAGACATGGAGATTAAGGGTGCCTCCCACCATGTCTATGCTGACCAGCC
ACACATCTTCAATGCTGTGGTGGAGGAGATCTGCGACTCAGTTGATTGA

Translation (342 aa):
MADDLEQQSQGWLSSWLPTWRPTSMSQLKNVEARILQCLQNKFLARYVSLPNQNKIWTVTVSPEQNDRTP
LVMVHGFGGGVGLWILNMDSLSARRTLHTFDLLGFGRSSRPAFPRDPEGAEDEFVTSIETWRETMGIPSM
ILLGHSLGGFLATSYSIKYPDRVKHLILVDPWGFPLRPTNPSEIRAPPAWVKAVASVLGRSNPLAVLRVA
GPWGPGLVQRFRPDFKRKFADFFEDDTISEYIYHCNAQNPSGETAFKAMMESFGWARRPMLERIHLIRKD
VPITMIYGSDTWIDTSTGKKVKMQRPDSYVRDMEIKGASHHVYADQPHIFNAVVEEICDSVD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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