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Report for CCDS53226.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53226.1 Public Mus musculus X Usp51 23 108 98 CCDS HistoryNCBI Gene:635253Re-query CCDS DB by CCDS ID:53226.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53226.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000095755.3 ENSMUSP00000093427.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000095755.3Link to Ensembl Protein Viewer:ENSMUSP00000093427.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000095755Re-query CCDS DB by Protein ID:ENSMUSP00000093427
Original member Current member NCBI NM_001137547.1 NP_001131019.1 Accepted alive Link to Nucleotide Sequence:NM_001137547.1Link to Protein Sequence:NP_001131019.1Re-query CCDS DB by Nucleotide ID:NM_001137547Re-query CCDS DB by Protein ID:NP_001131019Link to BLAST:NP_001131019.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001131019.1 661 B1AY15 661 100% 0 0

Chromosomal Locations for CCDS 53226.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 153007412 153009397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1986 nt):
ATGCGGGGTACACAGGGAGCCCAGGAGATGAAGCCGGAGCTGTGGCCGGAGCCCAAGCCCACGTCGGAGA
ACTTAACAAGTAGGGGCAGTGGCAGCTATGAGAAGGTGCTCCCTTCTATCCCGGCTGCTTGTCACACCAG
CTCCAGCTCGGTTTGCCCGCGCCGCAAGCCCCGCCCTCGGCCCCAGCCCAGGTCCCGCTCCAGGGGAGGG
CGTGGGCTCAAGGCCCCACCCCCGCCTCCCGCCAAACCTCCGCCTCCCCCGCCAGCGCCGCCACCTCCAC
CCCTGCCCAAGCAGCGGTCGGTGGCCTGGCGCAATTCCAGACGTAGATCCAGGCCTGGACCCAGACCCCA
AACACGGAAAAGCTACTCTAGTGACCATGGCTCCTCTAGGGATTCAGATGGCTCAGAGAACAGTTTACTG
GAGGTAGGGTCTAATAAGGGTCCCACAGGCTGCTGTCATGTAGAGAGCTTTAAAGTAGCTAAAAACTGGC
AGAGAAACCTGCGGATGATCTATCAGCGTTTCATTTGGAGTGGAACCCCGGAGACTAGGAAACGTAAGGC
AAAGTCATGCATCTGTCAAATATGTAGTACTCACAAGAACAGACTCCACTCTTGTCTGTCCTGTGTATTT
TTTGGATGCTTTACTGACAAACATATTCACATTCATGCCGAAACAACGCAACACAATTTAGCAGTAGACC
TCTGTCATGGGGTTATATATTGCTTTATGTGTAGGGATTATGTATATGACAAAGATATAGAAAAGATCGC
CAAAGAAACAAAAGAAAAAATTCTGGGACTGTTATCATCCCCTACAGGAGATGCATCTTATCAGCAGTTG
ATGGCATCTGAGGTGGAAGAAAACCAATTAACCTGCGAGTCAAAAGATCAGGAGACCAGTTTGGTAAAAC
CCAAGAAAAAGAGGAGGAAAAAGACAATGTATTATACTGTAGGCTTCAGAGGATTAATTAATCTTGGTAA
TACTTGCTTTATGAATTGTATTGTCCAAGTACTTACTCACATTCCGCTACTGAAAGAGTTCTTCCTTTCA
AATAAGCACAAATGTATGATGACAAGCCCCAGCTTGTGTTTAGTCTGCGAGATGTCTTTACTTTTTCAAG
CTATGTACTCGGGGAACCAAAGTCCTCATATTCCCTATAAATTACTACACCTGATATGGATCCATGCAGA
GCATCTAGCAGGCTACAGACAACAGGATGCTCAGGAGTTTCTTATTGCCATATTGGATGTGTTGCATAGA
CACAGCAGAGATGATGGTATCGACCAGGAAGGTAACTCCAACTGCTGTAATTGCATCATAGATCACATCT
TTACAGGTAGTCTGCAGTCAGATTTAACATGTCAAGTTTGTCATGGTGTCTCTACTACCATAGACCCATG
CTGGGACATTAGCTTGGATTTGCCTGGGCCTTATACTCCAGGGAGGGCTAGTAGTAGCACATCGAGTAGG
GATGGCCAGAAGCCACGAGTCATCTCACTTACAGATTGCCTGAAGTGGTTTACAAGGCCCGAAGACCTGG
GTAGCAGTGCCAAAATCAAATGCAGTCAATGCCAAAGCTACCAGGAATCTACCAAACAGCTCACAATGAA
GAAATTACCGATTGTGGCCTGCTTTCACCTGAAAAGATTTGAACATTTAGGCAAACAGAGACGAAAGATT
AATAGTTTTATCTCGTTTCCTTTGGAGCTGGACATGACCCCGTTCTTGGCTTCTACTAAAGAAAGCATAA
TGAAAGGCCAGCCATTAACAGAGTGTGTACCCAGTGAGAATAAGTATTCTTTGTTTGCAGTAATTAACCA
CCATGGAACTTTGGAAAGTGGCCATTACACCAGTTTTGTCCGACAGGAAAAAGACCAGTGGTTCAGCTGT
GATGATGCTGTAGTCACCAAGGCTACAATGGAAGAATTACTCAATAGTGAAGGGTATCTACTGTTCTATC
ATAGGCAAGATATAGAGAAAGAATAA

Translation (661 aa):
MRGTQGAQEMKPELWPEPKPTSENLTSRGSGSYEKVLPSIPAACHTSSSSVCPRRKPRPRPQPRSRSRGG
RGLKAPPPPPAKPPPPPPAPPPPPLPKQRSVAWRNSRRRSRPGPRPQTRKSYSSDHGSSRDSDGSENSLL
EVGSNKGPTGCCHVESFKVAKNWQRNLRMIYQRFIWSGTPETRKRKAKSCICQICSTHKNRLHSCLSCVF
FGCFTDKHIHIHAETTQHNLAVDLCHGVIYCFMCRDYVYDKDIEKIAKETKEKILGLLSSPTGDASYQQL
MASEVEENQLTCESKDQETSLVKPKKKRRKKTMYYTVGFRGLINLGNTCFMNCIVQVLTHIPLLKEFFLS
NKHKCMMTSPSLCLVCEMSLLFQAMYSGNQSPHIPYKLLHLIWIHAEHLAGYRQQDAQEFLIAILDVLHR
HSRDDGIDQEGNSNCCNCIIDHIFTGSLQSDLTCQVCHGVSTTIDPCWDISLDLPGPYTPGRASSSTSSR
DGQKPRVISLTDCLKWFTRPEDLGSSAKIKCSQCQSYQESTKQLTMKKLPIVACFHLKRFEHLGKQRRKI
NSFISFPLELDMTPFLASTKESIMKGQPLTECVPSENKYSLFAVINHHGTLESGHYTSFVRQEKDQWFSC
DDAVVTKATMEELLNSEGYLLFYHRQDIEKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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