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Report for CCDS49301.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49301.1 Public Mus musculus 13 Zfp953 23 108 98 CCDS HistoryNCBI Gene:629016Re-query CCDS DB by CCDS ID:49301.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 49301.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081582.7 ENSMUSP00000076700.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081582.7Link to Ensembl Protein Viewer:ENSMUSP00000076700.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000081582Re-query CCDS DB by Protein ID:ENSMUSP00000076700
Original member Current member NCBI NM_001038651.3 NP_001033740.1 Accepted alive Link to Nucleotide Sequence:NM_001038651.3Link to Protein Sequence:NP_001033740.1Re-query CCDS DB by Nucleotide ID:NM_001038651Re-query CCDS DB by Protein ID:NP_001033740Link to BLAST:NP_001033740.1

Chromosomal Locations for CCDS 49301.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 67342972 67343657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67345350 67345445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67347843 67347969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67360504 67360509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGGAGGATATGCTGTCATTCTGGGATGTCGTAATATATTTCTCTGCAGAAGAGTGGGAATACCTGGGTC
CTGCTCAGTGGAAATTATACAGGGATGTGACATTGGAGAATTACAACAACTTTGTTTTTCTGGATCTTGT
TTCCTCTACGCCATACCTGGTCAGATTTCTGGAGCAAATACAAGAGCCTTCAGATGTGAAGAGTCAAGCA
GACATCTCTATGTACTCAGGGGGAAAATGCTATACGTGCAAAGAATGTGGCAACATCTTTGTGGGGAAAG
AAGTATTTCAAAATCATCTGATAATTCATTTAGGAGGGAAGCCCTACAAGTGTGAAGAATGTGGCAAGTC
CTTCCGTTTTCCATCATTACTTTCTCAACACAAACTAATTCATACAGGAGAAAAACCCTACAAGTGTGAA
ACATGTAATAGGGCCTTCCATGTTCCATCAAAACTTTTTCAACATAAAATAATTCACACAAAAGCAAAAC
TCTACAAGTGTGAAGTATGTGGCAAGGCTTTCAATTATTCATCAAGACTTTTACACCATAGGACAATTCA
TACAGGAGAGAAACCATACAAGTGTGAAGTCTGTGGAAAGGCCTTCCACTCTTCACCATCACTTTATCAA
CACATGGGAATTCATACAGGAGAGAAACCCTGCAAGTGTGATAAATGTGGCAAGGCCTTCCGCTTTCCAT
CATTACTTTTAAAACACAAGATAAGTCATACAAACCAAAAACCCTACAAGTGTAAAATATGTGGAGATTT
CCTCCGCTCTCAATCATCACTTCATGAACACAAGTTAATGCATAAAGGAGAGAAACTCTATAAGTGTGAT
GTATGTGGCAAGGCCTTCGAATATCCATCAAGACTTTCAAAACATAAGAAAATTCATACAAGAGAGAAAC
CATAA

Translation (304 aa):
MEDMLSFWDVVIYFSAEEWEYLGPAQWKLYRDVTLENYNNFVFLDLVSSTPYLVRFLEQIQEPSDVKSQA
DISMYSGGKCYTCKECGNIFVGKEVFQNHLIIHLGGKPYKCEECGKSFRFPSLLSQHKLIHTGEKPYKCE
TCNRAFHVPSKLFQHKIIHTKAKLYKCEVCGKAFNYSSRLLHHRTIHTGEKPYKCEVCGKAFHSSPSLYQ
HMGIHTGEKPCKCDKCGKAFRFPSLLLKHKISHTNQKPYKCKICGDFLRSQSSLHEHKLMHKGEKLYKCD
VCGKAFEYPSRLSKHKKIHTREKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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