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Report for CCDS69309.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69309.1 Public Homo sapiens 7 TYW1B 24 110 108 CCDS HistoryNCBI Gene:441250Re-query CCDS DB by CCDS ID:69309.1Re-query CCDS DB by GeneID:441250See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 69309.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000620995.5 ENSP00000482502.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000620995.5Link to Ensembl Protein Viewer:ENSP00000482502.1Re-query CCDS DB by Nucleotide ID:ENST00000620995Re-query CCDS DB by Protein ID:ENSP00000482502
Original member Current member NCBI NM_001145440.3 NP_001138912.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145440.3Link to Protein Sequence:NP_001138912.2Re-query CCDS DB by Nucleotide ID:NM_001145440Re-query CCDS DB by Protein ID:NP_001138912Link to BLAST:NP_001138912.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138912.2 668 Q6NUM6-1 668 100% 0 0

Chromosomal Locations for CCDS 69309.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 72575498 72575719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72616672 72616839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72628887 72628997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72694687 72694822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72713621 72713798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72728822 72728931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72744484 72744601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72777416 72777533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72802400 72802522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72807066 72807356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72810471 72810665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72815380 72815481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72826855 72826985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 72828072 72828075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2007 nt):
ATGGATCCTTCTGCGGATACATGGGACCTCTCCTCACCTTTAATATCATTATGGATAAACAGGTTTTACA
TTTATCTGGGCTTTGCTGTTAGCATTAGCCTTTGGATTTGTGTCCAGATTGTCATCGAGATGCAGGGATT
TGCAACAGTTCTTGCTGAAGCAGTTACGTCCCTGGATCTGCCTGTGGCCATTATTAATCTAAAAGAATAT
GATCCAGATGATCATCTGATAGAAGAGGTGACTAGTAAAAATGTCTGTGTCTTCCTGGTTGCGACATACA
CTGACGGCCTACCAACCGAAAGTGCAGAGTGGTTCTGCAAATGGTTAGAGGAAGCATCCATTGATTTTCG
ATTTGGCAAAACTTACCTGAAGGGTATGAGAGATGCGGTATTTGGCCTGGGAAATTCTGCCTATGCTAGC
CACTTCAACAAGGTTGGCAAAAATGTTGACAAGTGGCTCTGGATGCTTGGCGTGCATCGTGTGATGAGTC
GAGGGGAGGGCGACTGCGACGTGGTTAAAAGCAAGCACGGCAGCATTGAGGCCAACTTCAGAGCATGGAA
GACCAAGTTCATCTCCCAGCTGCAGGCACTTCAGAAAGGGGAGAGAAAGAAGTCCTGTGGCGGCCACTGC
AAGAAAGGCAAATGTGAATCTCACCAACATGGCTCAGAGGAGAGGGAGGAAGGATCTCAAGAGCAGGACG
AATTGCATCACAGAGACACCAAGGAGGAAGAACCCTTCGAGAGCTCCAGTGAAGAAGAGTTTGGTGGTGA
GGACCATCAGAGCCTAAATTCCATTGTTGATGTTGAAGATTTGGGCAAAATTATGGATCACGTGAAGAAA
GAAAAGAGAGAAAAGGAACAGCAGGAAGAGAAGTCTGGTTTGTTCAGGAACATGGGGAGGAATGAAGATG
GTGAAAGAAGAGCTATGATAACTCCTGCTCTCCGAGAAGCCCTTACTAAACAAGTCGATGCTCCGAGGGA
GAGGAGCTTGTTACAAACACACATTCTATGGAATGAGAGCCATCGCTGCATGGAAACCACCCCGAGCTTG
GCGTGTGCTAATAAATGTGTCTTCTGTTGGTGGCACCACAACAACCCTGTGGGCACTGAATGGTTGTGGA
AGATGGACCAGCCTGAAATGATCTTGAAGGAAGCCATTGAAAACCATCAGAACATGATTAAGCAGTTTAA
AGGAGTACCGGGCGTCAAAGCAGAACGCTTTGAAGAAGGAATGACGGTAAAGCACTGTGCATTGTCCCTC
GTGGGAGAACCAATAATGTACCCAGAGATCAACAGGTTTTTGAAGCTACTCCACCAGTGTAAAATCTCCA
GCTTCCTGGTCACAAATGCACAATTTCCTGCGGAAATCAGGAACCTCGAGCCAGTTACTCAGCTGTATGT
CAGTGTGGATGCCAGTACCAAAGACAGCCTGAAGAAAATCGACCGCCCACTCTTCAAGGATTTCTGGCAG
CAATTCCTTGACAGTTTAAAAGCCTTGGCAGTCAAGCAACAACGAACTGTCTACAGACTGATGCTCGTGA
AAGCATGGAACGTGGACGAGCTCCAGGCCTACGCGCAGCTCGTGTCCCTGGGGAATCCTGACTTCATCGA
AGTGAAGGGCGTTACCTACTGCAGAGAAAGTTCAGCAAGCAGTCTTACCATGGCCCATGTGCCCTGGCAT
GAGGAAGTGGTACAGTTTGTCCGCGAGCTGGTGGATCTGATCCCCGAATATGAAATTGCATGTGAACACG
AACACTCTAATTGCCTCCTGATAGCACACAGAAAGTTTAAAATTGGTGGTGAATGGTGGACATGGATCGA
TTATAACCGCTTCCAGGAGCTCATCCAGGAATATGAAGATAGTGGTGGATCAAAAACGTTCAGCGCAAAG
GATTATATGGCCAGAACTCCTCACTGGGCATTATTTGGTGCCAATGAAAGAAGCTTTGATCCCAAGGACA
CAAGACATCAGAGAAAGAACAAATCAAAGGCTATTTCTGGATGTTGA

Translation (668 aa):
MDPSADTWDLSSPLISLWINRFYIYLGFAVSISLWICVQIVIEMQGFATVLAEAVTSLDLPVAIINLKEY
DPDDHLIEEVTSKNVCVFLVATYTDGLPTESAEWFCKWLEEASIDFRFGKTYLKGMRDAVFGLGNSAYAS
HFNKVGKNVDKWLWMLGVHRVMSRGEGDCDVVKSKHGSIEANFRAWKTKFISQLQALQKGERKKSCGGHC
KKGKCESHQHGSEEREEGSQEQDELHHRDTKEEEPFESSSEEEFGGEDHQSLNSIVDVEDLGKIMDHVKK
EKREKEQQEEKSGLFRNMGRNEDGERRAMITPALREALTKQVDAPRERSLLQTHILWNESHRCMETTPSL
ACANKCVFCWWHHNNPVGTEWLWKMDQPEMILKEAIENHQNMIKQFKGVPGVKAERFEEGMTVKHCALSL
VGEPIMYPEINRFLKLLHQCKISSFLVTNAQFPAEIRNLEPVTQLYVSVDASTKDSLKKIDRPLFKDFWQ
QFLDSLKALAVKQQRTVYRLMLVKAWNVDELQAYAQLVSLGNPDFIEVKGVTYCRESSASSLTMAHVPWH
EEVVQFVRELVDLIPEYEIACEHEHSNCLLIAHRKFKIGGEWWTWIDYNRFQELIQEYEDSGGSKTFSAK
DYMARTPHWALFGANERSFDPKDTRHQRKNKSKAISGC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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