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Report for CCDS52566.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52566.1 Public Mus musculus 8 Zfp963 23 108 98 CCDS HistoryNCBI Gene:620419Re-query CCDS DB by CCDS ID:52566.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52566.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000130458.7 ENSMUSP00000119087.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000130458.7Link to Ensembl Protein Viewer:ENSMUSP00000119087.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000130458Re-query CCDS DB by Protein ID:ENSMUSP00000119087
Original member Current member NCBI NM_001200023.1 NP_001186952.1 Accepted alive Link to Nucleotide Sequence:NM_001200023.1Link to Protein Sequence:NP_001186952.1Re-query CCDS DB by Nucleotide ID:NM_001200023Re-query CCDS DB by Protein ID:NP_001186952Link to BLAST:NP_001186952.1

Chromosomal Locations for CCDS 52566.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 69742650 69743610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69744192 69744252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69744461 69744587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 69749832 69749834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1152 nt):
ATGGCCTCAGTGAGCTTTGAGGACGTGGCTGTGCACTTCACCCAGGACGAGTGGGCTTTGCTGGATTCTT
CCCAGAAGAGTCTGTACAGAGATGTGATGCTGGAGATCTGCAGGAGCCTCGCTACGATAGGAAACAGATG
GGAAGAGGAGAATGTTGAAGACCATTATAAAAATCCCTGGAGAAATATGAGTGGTTCCATGTCAGAGACC
CCCTGTGAGAGGACAGAAGATGATCAGGTCGAAGAAACTCTGACATGGATCTCAAACCTTCATGCAAGCA
TGACAGTTTTTCCAGGACTAGCACCATATGAATCCCATATATGTGGGAAGGCTTCGACGAGTCACTCATC
CTCTGATAGGCATGCCACATTTCTCCCCTGTTATAAACCACGTGAGCGTGAGGACTGTGGGGCCGAGCAA
TATGACTTGAACTCTCTTACCAGCTTTCAAAGGTGTACGGAAGCCCACACTGGGAATGGGCCTTGTGAGT
GTGAGGTATGCTTAAGATCTTCCTGTTTTCCAAATCCACTAGGAACACATCAAGAGGCTCACAGTGGAAA
AACACCCTATCAATACAAGGAGTGTGGAAAGAACTCTGTTTGTGCACATGGAGGAAGCCCCACTATGGGA
AAGTTTTATGAATGTAATATATGTGGTAAAGCCTTGAGCTCCTCTACTGCCCTTCAAAGACATGAACTAA
TTCACACCGAAAGATTCTACGAATGCACGTATTGTGGTAAAGCTTTTAGATATCCCAAATACCTTCGATT
ACATGAAAGAATTCATACTGGAGAGAAACCCTATGAATGTAAACAATGTGGGAAAGCCTTTAGATTTCCT
GGTGCCCTGCCATTACATGAAAAAATTCACACTGGAGAAAAACCCTATAAGTGTAAACAGTGTGGAAAAG
CCTTTAGATTTCCTGGTTCCTTGCCATTACATGAAAAAATACACACTGGAGAAAAACCTTATGAGTGTAA
GCAGTGTGGGAAAGCCTTTAGGCGTCATTATCATCTTCAGTTACATGAAAAAATTCATACTGGAGAGAAA
CCCTATGAGTGTAAACAGTGTGGGAAAGCCTTCAGGCGGCACAGTCATCTTCAGAGACATGAACGGACCC
ATGGTGGAGAGAAACCCTTTGAATGTGAATAA

Translation (383 aa):
MASVSFEDVAVHFTQDEWALLDSSQKSLYRDVMLEICRSLATIGNRWEEENVEDHYKNPWRNMSGSMSET
PCERTEDDQVEETLTWISNLHASMTVFPGLAPYESHICGKASTSHSSSDRHATFLPCYKPREREDCGAEQ
YDLNSLTSFQRCTEAHTGNGPCECEVCLRSSCFPNPLGTHQEAHSGKTPYQYKECGKNSVCAHGGSPTMG
KFYECNICGKALSSSTALQRHELIHTERFYECTYCGKAFRYPKYLRLHERIHTGEKPYECKQCGKAFRFP
GALPLHEKIHTGEKPYKCKQCGKAFRFPGSLPLHEKIHTGEKPYECKQCGKAFRRHYHLQLHEKIHTGEK
PYECKQCGKAFRRHSHLQRHERTHGGEKPFECE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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