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Report for CCDS16950.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16950.1 Public Mus musculus 2 Acss2 23 108 98 CCDS HistoryNCBI Gene:60525Re-query CCDS DB by CCDS ID:16950.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16950.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000029135.14 ENSMUSP00000029135.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000029135.14Link to Ensembl Protein Viewer:ENSMUSP00000029135.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000029135Re-query CCDS DB by Protein ID:ENSMUSP00000029135
Original member Current member NCBI NM_019811.3 NP_062785.2 Accepted alive Link to Nucleotide Sequence:NM_019811.3Link to Protein Sequence:NP_062785.2Re-query CCDS DB by Nucleotide ID:NM_019811Re-query CCDS DB by Protein ID:NP_062785Link to BLAST:NP_062785.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062785.2 701 Q9QXG4 701 100% 0 0

Chromosomal Locations for CCDS 16950.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 155518107 155518284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155521981 155522176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155549191 155549282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155549476 155549579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155549799 155549871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155550103 155550178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155550355 155550469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155555854 155555991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155556333 155556503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155556778 155556911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155557097 155557229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155557310 155557366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155557549 155557629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155558591 155558699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155560622 155560690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155561030 155561206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155561746 155561820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 155561953 155562080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2106 nt):
ATGGGGCTTCCCGAGGAGCGGCGCAAGAGCGGCAGTGGAAGCCGGGCTCGTGAGGAGACCGGCGCCGAGG
GCCGGGTGCGGGGTTGGTCCCCGCCGCCGGAGGTCAGACGCTCGGCGCACGTCCCCTCTCTGCAGCGCTA
CCGCGAGCTGCACCGGCGTTCTGTGGAGGAGCCACGGGAGTTTTGGGGAAACATTGCCAAGGAATTTTAC
TGGAAAACCGCATGCCCTGGCCCATTCCTCCAGTACAACTTTGATGTGACTAAAGGGAAAATATTCACTG
AGTGGATGAAAGGAGCAACTACAAACATCTGCTACAACGTGCTGGATCGAAATGTCCATGAGAAAAAACT
TGGCGACAAAGTTGCTTTTTACTGGGAGGGCAATGAGCCAGGGGAGACCACCAAGATCACATACCGTGAA
CTCCTGGTCCAGGTGTGTCAGTTCAGCAATGTTCTCCGTAAACAGGGCATTCAGAAGGGTGACCGAGTGG
CCATCTACATGCCTATGATCTTGGAACTTGTGGTGGCTATGCTGGCATGCGCTCGCCTTGGAGCTTTGCA
CTCCATTGTGTTTGCAGGCTTCTCTGCAGAGTCTCTCTGTGAAAGGATCTTGGATTCCAGTTGCTGCCTG
CTCATCACTACAGATGCCTTCTACAGGGGGGAAAAACTTGTGAACCTGAAGGAGCTGGCTGATGAGTCCT
TGGAGAAGTGCCGAGAGAAGGGCTTCCCAGTGAGATGCTGCATTGTGGTCAAACATCTGGGGCGGGCAGA
GCTGGGCATGAATGACTCCCCCAGCCAGTCCCCACCAGTTAAGAGGCCATGTCCAGATGTCCAGATCTGC
TGGAACGAAGGGGTTGACTTATGGTGGCATGAACTCATGCAGCAGGCAGGAGACGAGTGTGAGCCTGAGT
GGTGTGATGCTGAGGACCCACTCTTCATCTTGTACACCAGTGGCTCCACAGGCAAACCTAAGGGTGTGGT
GCACACAATTGGAGGCTATATGCTCTATGTGGCTACAACTTTCAAGTATGTGTTTGATTTCCACCCGGAA
GATGTGTTCTGGTGCACAGCAGACATCGGCTGGATCACTGGTCATTCCTATGTCACCTATGGGCCACTGG
CTAATGGTGCCACTAGTGTTTTGTTTGAGGGGATCCCCACATACCCAGATGAAGGGCGCTTGTGGAGCAT
TGTGGACAAATACAAGGTGACCAAGTTCTACACGGCACCAACAGCCATCCGGATGCTCATGAAGTTTGGA
GATGATCCTGTCACCAAGCATAGCCGGGCATCCCTGCAGGTGCTGGGCACAGTAGGTGAACCCATCAACC
CTGAAGCCTGGCTATGGTACCACCGGGTAGTAGGTTCCCAGCGCTGCCCCATTGTAGACACCTTCTGGCA
AACAGAAACAGGTGGCCATATGCTGACCCCTCTCCCTGGCGCCACACCCATGAAACCTGGTTCTGCTTCT
TTCCCATTCTTCGGTGTAGCGCCTGCAATCCTGAATGAGTCCGGGGAGGAGCTGGAAGGGGAAGCTGAAG
GTTATCTGGTGTTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACACACGGTTTGA
GACCACCTACTTTAAGAAGTTCCCTGGCTACTATGTGACCGGAGATGGCTGCCGACGGGATCAGGATGGC
TATTACTGGATCACGGGCAGGATTGATGACATGCTCAATGTGTCTGGACATCTCCTGAGTACAGCAGAGG
TGGAATCGGCACTTGTGGAACACGAGGCTGTCGCAGAGGCAGCTGTGGTGGGCCACCCTCATCCTGTGAA
GGGCGAATGCCTCTACTGCTTTGTTACCTTGTGTGATGGCCATACCTTCAGCCCCACACTCACAGAGGAA
CTCAAGAAGCAGATTAGAGAAAAGATTGGCCCCATTGCCACACCAGACTACATCCAGAATGCACCTGGCT
TGCCTAAAACACGCTCAGGGAAAATCATGAGGCGAGTTCTCCGGAAGATTGCTCAGAATGACCATGACCT
GGGGGATACATCTACGGTGGCTGACCCATCTGTCATCAACCATCTCTTCAGTCACCGCTGCCTGACCACC
CAGTGA

Translation (701 aa):
MGLPEERRKSGSGSRAREETGAEGRVRGWSPPPEVRRSAHVPSLQRYRELHRRSVEEPREFWGNIAKEFY
WKTACPGPFLQYNFDVTKGKIFTEWMKGATTNICYNVLDRNVHEKKLGDKVAFYWEGNEPGETTKITYRE
LLVQVCQFSNVLRKQGIQKGDRVAIYMPMILELVVAMLACARLGALHSIVFAGFSAESLCERILDSSCCL
LITTDAFYRGEKLVNLKELADESLEKCREKGFPVRCCIVVKHLGRAELGMNDSPSQSPPVKRPCPDVQIC
WNEGVDLWWHELMQQAGDECEPEWCDAEDPLFILYTSGSTGKPKGVVHTIGGYMLYVATTFKYVFDFHPE
DVFWCTADIGWITGHSYVTYGPLANGATSVLFEGIPTYPDEGRLWSIVDKYKVTKFYTAPTAIRMLMKFG
DDPVTKHSRASLQVLGTVGEPINPEAWLWYHRVVGSQRCPIVDTFWQTETGGHMLTPLPGATPMKPGSAS
FPFFGVAPAILNESGEELEGEAEGYLVFKQPWPGIMRTVYGNHTRFETTYFKKFPGYYVTGDGCRRDQDG
YYWITGRIDDMLNVSGHLLSTAEVESALVEHEAVAEAAVVGHPHPVKGECLYCFVTLCDGHTFSPTLTEE
LKKQIREKIGPIATPDYIQNAPGLPKTRSGKIMRRVLRKIAQNDHDLGDTSTVADPSVINHLFSHRCLTT
Q


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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