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Report for CCDS18967.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18967.1 Public Mus musculus 4 H6pd 23 108 98 CCDS HistoryNCBI Gene:100198Re-query CCDS DB by CCDS ID:18967.1Re-query CCDS DB by GeneID:100198See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18967.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030830.3 ENSMUSP00000030830.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030830.3Link to Ensembl Protein Viewer:ENSMUSP00000030830.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000030830Re-query CCDS DB by Protein ID:ENSMUSP00000030830
Original member Current member NCBI NM_173371.4 NP_775547.2 Accepted alive Link to Nucleotide Sequence:NM_173371.4Link to Protein Sequence:NP_775547.2Re-query CCDS DB by Nucleotide ID:NM_173371Re-query CCDS DB by Protein ID:NP_775547Link to BLAST:NP_775547.2

Chromosomal Locations for CCDS 18967.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 149981558 149982921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149983903 149984172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149994469 149994586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 149995745 149996381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 150008751 150008755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2394 nt):
ATGAAGCACACAGGCATTTGGAAGATGCTCCTAGCGGCAATGTGCTTGGCCCTTCTGGGCTGCCTACAGG
CGCAGGAACTCAAGGGTCATGTTTCCATAATCCTGCTGGGAGCAACCGGGGACCTAGCTAAAAAGTACCT
GTGGCAGGGACTGTTTCAGCTATACCTGGATGAGGCTGGGAAGGGCCACAGTTTCAGCTTCCACGGTGCT
GCCCTGACAGCCCCCCAGCAAGGCCAGAAGCTCATGGACAAGGTCTTGGAATCCCTCTCCTGTCCCAAGG
ACTTGGTACCCAGTCGCTGTGATGAACTCAAGGGTCAGTTTCTACAGCTGAGCCAATACCGCCAGCTGAA
GACAGTGGAGGACTATCAGACCCTCAACAAGGATATTGAGACCCAGGTCCAGCAGGATGGGCTCTGGGAG
GCAGGCAGGATCTTCTACTTCAGTGTGCCGCCCTTTGCCTACGCAGACATTGCCCGTAACATCAACAGCA
GCTGCCGACCACACCCAGGTGCCTGGCTACGGGTTGTTTTTGAAAAACCCTTTGGCCATGACCACCTCTC
AGCCCAGCAGCTGGCTTCAGAACTTGGGAGCTTTTTCCAGGAGGAGGAGATGTACCGTGTGGATCATTAC
CTCGGCAAGCAGGCGGTGGCTCAGATCCTGCCCTTCCGAGATCAGAACCGCAAGGCCTTGGATGGCCTCT
GGAACAGGCACCATGTGGAGCGGGTGGAGATCATCTTGAAGGAGACCATAGATGCGGAAGGTCGGGCCAG
TTTCTATGAGGAGTATGGCGTCATCCGTGACACGCTGCAGAACCACCTGACTGAGATCCTCACGCTGGTG
GCCATGGAACTGCCTCTCAACATCAGCAGCTCAGCCGCCGTGCTCCAGCATAAGCTCTGGGCCTTCCAGG
CCCTGCGGGGGCTGCAGAAGAGCAGTGCCATCCTGGGCCAGTACCAGGCCTACAGCGGACAGGTGCGCCG
AGAGCTGCAGAAGCCAGACGGCTTCCAGAGCCTGACACCAACCTTCGCAGGTGTCCTTGTCCACATCGAC
AACCTGCGCTGGGAGGGTGTCCCTTTCATCCTGATGTCTGGCAAGGCCTTGGATGAGAGAGTGGGCTATG
TTCGGATTGTGTTTAAGAATCGGGCGTACTGCACCCAGAGCGAGAGACACTGGGTGCCGGAGCAGAGCCG
GTGCCTGCCCCAGCAGATTATCTTCTACATTGGACACGGTGAGCTGGGCCACCCTGCCATTCTGGTCAGC
CGGAACCTGTTCAAACCCTCACTACCCACTCAGAAGTGGAAGGAGGTGCAGGACCAGCCTGGGCTCCGCC
TGTTCGGCCGTCCTCTGTCTGATTACTACGCCTACAGGCCTGTGCGGGAGCAAGACGCCTACTCCACCCT
CCTGTCGCACATCTTCCACTGCCGAAAGGAGTCCTTCATCACCACAGAGAACCTCTTGGCCTCCTGGGTC
TTCTGGACCCCGTTACTGGACAGCCTGGCCTTTGAAGTTCCACGCCCATACCCAGGGGGAGCCGAGAATG
GCCAGCTGCTGGACTTTGAGTTTAGCGGTGGTCAGCTGACCTTCTCCCAGCAGCAGCTGGAGGTGCTGAT
ACCAGATCTAGGCTCAGTCCCAAAGCCCAGTGACTTCCAGGTCCTCGGGGCCCGGTATAGACAGAGCCCA
CTGATTACCGCCTGGCCAGAGGAGCTGATCTCTAAGCTGGCCAGTGACATTGAAGCCGCCGCGGTGCAGG
CAGTACGGCACTTCGGCAAGTTCCACCTGGCACTGTCAGGTGGTTCGAGCCCCATAGCTCTCTTCCAGCA
GCTGGCCACAGGACATTACAGCTTCCCCTGGGCCCACACACACCTCTGGCTGGTTGATGAGCGTTGTGTC
CCTCTCTCAGATCCAGACTCCAACTTCCAGGGCCTGCAGGCTCACCTGCTACAGCACGTCAGGGTACCCT
ACTACAACATCCACCCGATGCCAGTGCACCTGCACCAGCGGCTCTGTGCCGAGGAGGACCAGGGAGCTCA
GACCTATGCCAGTGAGATCTCAGCCCTGGTGGCCAACAGCAGCTTCGACCTGGTGCTCCTGGGCATGGGC
ACCGACGGGCACACAGCTTCTCTGTTCCCACAGTCCCCCACAGGCCTGGATGGTGATCAGCTGGTGGTGC
TGACGGAGAGCCCGTTCAGGCCACACCAACGCATGAGCCTCAGCCTGCCCCTCATCAACCGAGCCAAGAA
GGTAGCTGTCCTGGTCATGGGCAGGACAAAACGTGAGATCACAACGTTGGTGAGCCGCGTGGGCCATGAA
CCCAAGAAGTGGCCCATCTCAGGTGTGGTGCCTCTTTCTGGGCAGCTGGTTTGGTACATGGATTACGAGG
CCTTTCTGGGATGA

Translation (797 aa):
MKHTGIWKMLLAAMCLALLGCLQAQELKGHVSIILLGATGDLAKKYLWQGLFQLYLDEAGKGHSFSFHGA
ALTAPQQGQKLMDKVLESLSCPKDLVPSRCDELKGQFLQLSQYRQLKTVEDYQTLNKDIETQVQQDGLWE
AGRIFYFSVPPFAYADIARNINSSCRPHPGAWLRVVFEKPFGHDHLSAQQLASELGSFFQEEEMYRVDHY
LGKQAVAQILPFRDQNRKALDGLWNRHHVERVEIILKETIDAEGRASFYEEYGVIRDTLQNHLTEILTLV
AMELPLNISSSAAVLQHKLWAFQALRGLQKSSAILGQYQAYSGQVRRELQKPDGFQSLTPTFAGVLVHID
NLRWEGVPFILMSGKALDERVGYVRIVFKNRAYCTQSERHWVPEQSRCLPQQIIFYIGHGELGHPAILVS
RNLFKPSLPTQKWKEVQDQPGLRLFGRPLSDYYAYRPVREQDAYSTLLSHIFHCRKESFITTENLLASWV
FWTPLLDSLAFEVPRPYPGGAENGQLLDFEFSGGQLTFSQQQLEVLIPDLGSVPKPSDFQVLGARYRQSP
LITAWPEELISKLASDIEAAAVQAVRHFGKFHLALSGGSSPIALFQQLATGHYSFPWAHTHLWLVDERCV
PLSDPDSNFQGLQAHLLQHVRVPYYNIHPMPVHLHQRLCAEEDQGAQTYASEISALVANSSFDLVLLGMG
TDGHTASLFPQSPTGLDGDQLVVLTESPFRPHQRMSLSLPLINRAKKVAVLVMGRTKREITTLVSRVGHE
PKKWPISGVVPLSGQLVWYMDYEAFLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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