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Report for CCDS57131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57131.1 Public Mus musculus 19 Znhit2 23 108 98 CCDS HistoryNCBI Gene:29805Re-query CCDS DB by CCDS ID:57131.1Re-query CCDS DB by GeneID:29805See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57131.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000162726.4 ENSMUSP00000134031.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000162726.4Link to Ensembl Protein Viewer:ENSMUSP00000134031.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000162726Re-query CCDS DB by Protein ID:ENSMUSP00000134031
Original member Current member NCBI NM_013859.2 NP_038887.2 Accepted alive Link to Nucleotide Sequence:NM_013859.2Link to Protein Sequence:NP_038887.2Re-query CCDS DB by Nucleotide ID:NM_013859Re-query CCDS DB by Protein ID:NP_038887Link to BLAST:NP_038887.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038887.2 399 Q9QY66 399 100% 0 0

Chromosomal Locations for CCDS 57131.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 6061227 6062426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1200 nt):
ATGGAGCCCGCTGGGCTCTGCGGCTTCTGCCCGGCCGGGGAAGCGCTGCCTGCGCGCTACACCTGCCCGC
GCTGCAATGCTCCCTACTGCTCGCTGCGCTGCTACCGGGCGCACGGCGCCTGCGCCGAAGACTTTTACCG
CGACCAAGTGCTGCGAGAGCTCCGTGGCCGAAGCGCTTCGCCCAGCCGTCTGGCGGGCGCGTTACGCCGG
CTGCGCGAACAACGCGAGGCCGAGGATGAGCCCGAGGAAGCAGGCCTCGGGCCCGGGGCGCGGCCGGGCG
GCCTTTCTGGACTTTGGGAACGTTTAACGCCGGCTGAGAAGGCGGCGTTCGAGCGGCTGCTGAGCCGTGG
CGAAGCCGGACGCCTTCTGCCTCCGTGGCGGCCCTGGTGGTGGGGCCGCGGCACCGGCCCACGTTTGCTG
GAGGAGCTGGATCATGCCGCGAACAGAGATCTTGCGGAGCCGGAGCCCGCCCCTGCGAGGACCGCGCTGC
AATCTGGGGATGATGCCGCTGCCGCAGAGCCATTTGCTGAAGACTCCTGTGCCGCCAGACCGCTAGCATT
GCCTGCTCGCATCCCAGCACTGGCCAGTCTGAGCCGCAGCCCGGCATCGCCGCTGGTGCGCTTCCAGCTG
CCCAACGTGCTGTTCGCCTACGCTCATACTCTCGCCCTGTATCATGGAGGGGACGACGACGCGCTACTCT
CTGACTTCTGTGCCACCCTGCTCGATGTTTCTGGGGCCCTGGGAGCCCAGCAAGTCTTTGGCTCTACAGA
GGAAGCCCTGCAGGCCGCAGCCCACGTACTGGAAGCGGGCGAGCACCCACCTGGGCCCCTGGGTACGCGG
GGTGCTATGCAAGAAGTTGCCCGAATCCTGCTGGGCGAGGGTCCAGTCAATCAGAAAGGCTACACTCTGA
CAGCACTGGGGCACCTAGCTCAGACCCTGGGACGAGCCCGGAAGCAGGCTGTGATTGGTGGAGAGCGAGA
TCGACTTTACCGGGCTCGGAAGAAGTGCCAGTTCCTGCTGGCTTGGACCAACGAAAACGAGGCTGCCCTC
ACACCCCTGGCGCTAGACTGTGCCAGAGCCCACCGAGCCCATGCTGTGACAGCTGAGGAGATGGCAACGC
TTACTGGAGAGTTAGAACGGCTTTGGGGAGGCCCAGTGCCACCCACTCCAAGGACTCTCATTGAGGAACT
CCCTGGCTGA

Translation (399 aa):
MEPAGLCGFCPAGEALPARYTCPRCNAPYCSLRCYRAHGACAEDFYRDQVLRELRGRSASPSRLAGALRR
LREQREAEDEPEEAGLGPGARPGGLSGLWERLTPAEKAAFERLLSRGEAGRLLPPWRPWWWGRGTGPRLL
EELDHAANRDLAEPEPAPARTALQSGDDAAAAEPFAEDSCAARPLALPARIPALASLSRSPASPLVRFQL
PNVLFAYAHTLALYHGGDDDALLSDFCATLLDVSGALGAQQVFGSTEEALQAAAHVLEAGEHPPGPLGTR
GAMQEVARILLGEGPVNQKGYTLTALGHLAQTLGRARKQAVIGGERDRLYRARKKCQFLLAWTNENEAAL
TPLALDCARAHRAHAVTAEEMATLTGELERLWGGPVPPTPRTLIEELPG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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