NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS12868.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12868.1 Public Homo sapiens 19 CACNG7 24 110 108 CCDS HistoryNCBI Gene:59284Re-query CCDS DB by CCDS ID:12868.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12868.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000222212.6 ENSP00000222212.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000222212.6Link to Ensembl Protein Viewer:ENSP00000222212.2Re-query CCDS DB by Nucleotide ID:ENST00000222212Re-query CCDS DB by Protein ID:ENSP00000222212
Original member Current member EBI ENST00000391767.6 ENSP00000375647.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000391767.6Link to Ensembl Protein Viewer:ENSP00000375647.1Re-query CCDS DB by Nucleotide ID:ENST00000391767Re-query CCDS DB by Protein ID:ENSP00000375647
Original member Current member NCBI NM_031896.5 NP_114102.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031896.5Link to Protein Sequence:NP_114102.2Re-query CCDS DB by Nucleotide ID:NM_031896Re-query CCDS DB by Protein ID:NP_114102Link to BLAST:NP_114102.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114102.2 275 P62955 275 100% 0 0

Chromosomal Locations for CCDS 12868.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 53912832 53913027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53914500 53914586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53915365 53915505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53941470 53941615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 53942036 53942293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGAGTCACTGCAGCAGCCGCGCCCTGACCCTGCTGAGCAGCGTGTTTGGTGCGTGTGGCCTGCTCCTGG
TAGGCATCGCGGTCAGCACTGACTACTGGCTGTACATGGAAGAAGGCACAGTGCTACCGCAGAACCAGAC
CACCGAGGTCAAGATGGCCCTGCACGCCGGCCTCTGGCGAGTCTGCTTCTTTGCAGGTCGGGAGAAAGGT
CGCTGTGTGGCCTCAGAATATTTTCTTGAACCGGAGATCAATTTGGTGACGGAAAACACGGAGAATATTC
TGAAGACAGTGCGCACGGCCACCCCCTTCCCCATGGTCAGCCTCTTCCTCGTGTTCACGGCCTTCGTCAT
CAGCAACATCGGCCACATCCGCCCGCAGAGGACCATTCTGGCTTTTGTCTCTGGCATCTTCTTCATACTA
TCGGGCCTCTCCTTGGTGGTGGGCTTGGTTCTTTACATCTCCAGCATCAACGACGAGGTCATGAACAGGC
CCAGCAGCTCTGAGCAGTATTTTCATTATCGCTACGGGTGGTCTTTTGCCTTCGCCGCTTCCTCCTTCCT
ACTCAAAGAGGGGGCCGGCGTGATGTCCGTGTACCTGTTCACCAAGCGCTACGCGGAGGAGGAGATGTAC
CGTCCACACCCGGCCTTCTACCGCCCGCGTCTCAGCGACTGCTCCGACTACTCGGGCCAGTTCCTGCAGC
CCGAGGCGTGGCGCCGCGGCCGGAGCCCCTCCGACATCTCCAGCGACGTGTCCATCCAAATGACGCAGAA
CTACCCTCCCGCCATCAAGTACCCGGACCACCTGCACATCTCCACCTCGCCCTGCTGA

Translation (275 aa):
MSHCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGTVLPQNQTTEVKMALHAGLWRVCFFAGREKG
RCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNIGHIRPQRTILAFVSGIFFIL
SGLSLVVGLVLYISSINDEVMNRPSSSEQYFHYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEEMY
RPHPAFYRPRLSDCSDYSGQFLQPEAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH