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Report for CCDS80934.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80934.1 Public Mus musculus 8 Nudt7 23 108 98 CCDS HistoryNCBI Gene:67528Re-query CCDS DB by CCDS ID:80934.1Re-query CCDS DB by GeneID:67528See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80934.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000134593.1 ENSMUSP00000116868.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000134593.1Link to Ensembl Protein Viewer:ENSMUSP00000116868.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000134593Re-query CCDS DB by Protein ID:ENSMUSP00000116868
Original member Current member NCBI NM_001290182.1 NP_001277111.1 Accepted alive Link to Nucleotide Sequence:NM_001290182.1Link to Protein Sequence:NP_001277111.1Re-query CCDS DB by Nucleotide ID:NM_001290182Re-query CCDS DB by Protein ID:NP_001277111Link to BLAST:NP_001277111.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277111.1 171 Q99P30-5 171 100% 0 0

Chromosomal Locations for CCDS 80934.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 114133666 114133700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 114136338 114136491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 114147895 114148221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (516 nt):
ATGTCGCGACCTTGTGGACTCCCGGAGCCTGTCAGAAACAATCTGATAGATGATGCCAAGGCTCGCCTGA
GAAAGTCTGATGTCGGGACCAGATATTCTCACCTGTCCTCTAATAAATTCTCTGTCCTTGTACCACTGCT
GGCCAGAGGAGGAAAGTTGTATTTGATGTTCACGGTCCGCTCAGACAAGCTGAAAAGGGAACCTGGAGAA
GTCTGCTTCCCTGGAGGAAAGAGGGACCCGGTGGACACAGATGACACAGCCACTGCTCTCCGTGAAGCCC
AGGAGGAGGTGGGGCTGCATCCCCACCAAGTGGAGGTGGTCTCTCACCTGGTGCCATACGTATTTGATGT
AAGGACTGGCATGGGCCCTCCTGAGCTCTCAGGGGCTTCCACAAAATTCCCAAACACACTGGGCACAGAG
CCAGGAGAACTGAGTCCTTGTGTGGACTCTGTTCTTTGTGAGCTCTGTGGCCCTTCTCACTCCATCCAGG
AAGAAAGAGGGGAGCCACCTCAGTGA

Translation (171 aa):
MSRPCGLPEPVRNNLIDDAKARLRKSDVGTRYSHLSSNKFSVLVPLLARGGKLYLMFTVRSDKLKREPGE
VCFPGGKRDPVDTDDTATALREAQEEVGLHPHQVEVVSHLVPYVFDVRTGMGPPELSGASTKFPNTLGTE
PGELSPCVDSVLCELCGPSHSIQEERGEPPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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