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Report for CCDS24893.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24893.1 Public Mus musculus 11 Naa38 23 108 98 CCDS HistoryNCBI Gene:78304Re-query CCDS DB by CCDS ID:24893.1Re-query CCDS DB by GeneID:78304See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24893.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000144531.1 ENSMUSP00000123155.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000144531.1Link to Ensembl Protein Viewer:ENSMUSP00000123155.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000144531Re-query CCDS DB by Protein ID:ENSMUSP00000123155
Original member Current member NCBI NM_030083.2 NP_084359.1 Accepted alive Link to Nucleotide Sequence:NM_030083.2Link to Protein Sequence:NP_084359.1Re-query CCDS DB by Nucleotide ID:NM_030083Re-query CCDS DB by Protein ID:NP_084359Link to BLAST:NP_084359.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084359.1 125 Q9D2U5-1 125 100% 0 0

Chromosomal Locations for CCDS 24893.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 69395892 69395972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69396177 69396360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 69396520 69396632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (378 nt):
ATGGCCGGAGCTGGGCCGACCATGCTACTACGAGAGGAGAATGGCTGTTGCAGTCGGCGTCAGAGCAGCT
CCAGCGCCGGGGACTCTGATGGGGAACAGGAGGACTCGCCGGCCACGCGTGCACGGCAGCAACTAGAGGC
ATTGCTCAACAAGACCATGCGTATCCGTATGACAGATGGAAGGACACTAGTCGGCTGCTTCCTGTGCACT
GATCGCGACTGTAATGTCATCCTGGGCTCTGCGCAAGAGTTCCTCAAGCCTTCTGATTCATTTTCTGCGG
GCGAACCCCGTGTGCTGGGTCTGGCCATGGTACCAGGACACCACATCGTTTCTATTGAAGTCCAAAGGGA
GAGTCTGTCGGGGGGCCCGTATCTCTGA

Translation (125 aa):
MAGAGPTMLLREENGCCSRRQSSSSAGDSDGEQEDSPATRARQQLEALLNKTMRIRMTDGRTLVGCFLCT
DRDCNVILGSAQEFLKPSDSFSAGEPRVLGLAMVPGHHIVSIEVQRESLSGGPYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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