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Report for CCDS34399.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34399.1 Public Homo sapiens 6 C6orf47 24 110 108 CCDS HistoryNCBI Gene:57827Re-query CCDS DB by CCDS ID:34399.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34399.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375911.2 ENSP00000365076.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375911.2Link to Ensembl Protein Viewer:ENSP00000365076.1Re-query CCDS DB by Nucleotide ID:ENST00000375911Re-query CCDS DB by Protein ID:ENSP00000365076
Original member Current member NCBI NM_021184.4 NP_067007.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021184.4Link to Protein Sequence:NP_067007.3Re-query CCDS DB by Nucleotide ID:NM_021184Re-query CCDS DB by Protein ID:NP_067007Link to BLAST:NP_067007.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067007.3 294 O95873 294 100% 0 0

Chromosomal Locations for CCDS 34399.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 31659063 31659947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGTTCCTGCGACGGCTTGGTGGCTGGCTACCTCGCCCTTGGGGCCGCCGGAAACCAATGAGGCCTGACC
CGCCTTACCCAGAACCCAGACGGGTGGACAGCTCCTCGGAGAATTCAGGAAGTGACTGGGATAGTGCCCC
AGAAACCATGGAAGATGTGGGGCATCCCAAGACTAAGGACTCGGGGGCATTGAGGGTTTCTGGGGCTGCT
TCCGAACCAAGCAAGGAGGAGCCCCAAGTTGAGCAGCTAGGGAGCAAAAGAATGGATTCCCTCAAGTGGG
ACCAGCCTATCTCTAGCACTCAAGAGTCTGGGAGACTGGAGGCTGGAGGGGCCAGTCCCAAACTCAGATG
GGATCATGTGGATTCAGGTGGCACCAGGAGACCAGGGGTGTCCCCTGAAGGGGGACTGAGCGTCCCTGGG
CCAGGAGCCCCATTGGAGAAACCTGGTAGGCGTGAGAAGCTGTTGGGCTGGCTGCGGGGGGAACCAGGAG
CTCCCTCCCGGTACTTGGGGGGCCCAGAAGAGTGTCTGCAGATCTCCACCAACCTGACCCTGCATCTTCT
GGAGCTGCTGGCCTCTGCCCTGCTGGCCCTGTGCTCACGACCACTGCGGGCAGCCTTGGACACACTGGGC
CTGCGTGGACCGCTGGGCCTCTGGCTACATGGCCTACTGTCCTTCCTGGCTGCCCTGCATGGGCTCCATG
CTGTTCTGAGCCTACTTACTGCCCACCCTTTGCACTTCGCCTGCCTCTTTGGTCTCCTGCAGGCCTTGGT
GCTGGCTGTCAGCCTCCGGGAGCCCAATGGGGATGAGGCGGCCACTGACTGGGAGAGTGAGGGGTTGGAG
AGGGAAGGTGAGGAGCAGAGGGGAGACCCGGGAAAGGGGCTGTGA

Translation (294 aa):
MFLRRLGGWLPRPWGRRKPMRPDPPYPEPRRVDSSSENSGSDWDSAPETMEDVGHPKTKDSGALRVSGAA
SEPSKEEPQVEQLGSKRMDSLKWDQPISSTQESGRLEAGGASPKLRWDHVDSGGTRRPGVSPEGGLSVPG
PGAPLEKPGRREKLLGWLRGEPGAPSRYLGGPEECLQISTNLTLHLLELLASALLALCSRPLRAALDTLG
LRGPLGLWLHGLLSFLAALHGLHAVLSLLTAHPLHFACLFGLLQALVLAVSLREPNGDEAATDWESEGLE
REGEEQRGDPGKGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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