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Report for CCDS34671.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34671.1 Public Homo sapiens 7 CCDC146 24 110 108 CCDS HistoryNCBI Gene:57639Re-query CCDS DB by CCDS ID:34671.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34671.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285871.5 ENSP00000285871.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000285871.5Link to Ensembl Protein Viewer:ENSP00000285871.4Re-query CCDS DB by Nucleotide ID:ENST00000285871Re-query CCDS DB by Protein ID:ENSP00000285871
Original member Current member NCBI NM_020879.3 NP_065930.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020879.3Link to Protein Sequence:NP_065930.2Re-query CCDS DB by Nucleotide ID:NM_020879Re-query CCDS DB by Protein ID:NP_065930Link to BLAST:NP_065930.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065930.2 955 Q8IYE0-1 955 100% 0 0

Chromosomal Locations for CCDS 34671.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 77167669 77167824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77236947 77237029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77241691 77241900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77254506 77254563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77256333 77256509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77258995 77259068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77260009 77260236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77262121 77262307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77273694 77273789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77274482 77274652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77278752 77278840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77278937 77279101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77280429 77280653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77282557 77282785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77286798 77286926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77287440 77287577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77292952 77293200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 77294663 77294866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2868 nt):
ATGGAAGACAGTAGCACAGACACAGAAAAAGAAGAGGAAGAGGAGAAAGATGAAAAGGATCAAGAGCCCA
TTTATGCCATAGTGCCCACAATTAACATTCAAGATGAGCGGTTTGTTGATTTATCTGAAACTCCAGCTTT
CATTTTTCTGCATGAGTTACATGCTATGGGAAAACTTCCTGGAACCAGAATGGCAGCGTTAAAAGCCAAG
TATACCTTGCTGCATGACGCCGTGATGAGCACACAAGAGTCAGAGGTCCAACTGCTACAGAATGCCAAAC
GTTTCACTGAGCAAATACAACAGCAGCAGTTTCACCTGCAGCAAGCTGATAATTTTCCAGAAGCATTCTC
CACGGAGGTCTCCAAAATGAGAGAACAACTTCTCAAGTATCAAAATGAATATAATGCAGTGAAGGAAAGA
GAGTTCCATAATCAGTACAGATTAAATAGCTTAAAGGAAGAAAAAATCATCATAGTAAAAGAATTTGAGA
AGATAACAAAGCCAGGAGAAATGGAGAAGAAGATGAAAATATTGAGAGAAAGCACTGAAGAATTACGTAA
AGAAATAATGCAGAAGAAATTAGAAATTAAAAATTTACGAGAAGATTTGGCATCTAAACAAAAGCAATTA
TTAAAAGAGCAGAAGGAACTAGAAGAATTGTTGGGACATCAGGTCGTCCTAAAGGATGAAGTGGCCCACC
ATCAAACCATTCCAGTACAAATTGGAAAAGAGATAGAAAAAATAACACGCAAAAAAGTAGAAATGGAAAA
GAAAAAAATTGTCTTGGAACAAGAAGTCAAAACGCTAAATGACTCCCTAAAGAAAGTTGAAAACAAGGTT
AGTGCTATAGTGGATGAGAAGGAAAATGTAATAAAGGAAGTTGAAGGCAAACGAGCCTTACTTGAAATCA
AAGAACGAGAACATAACCAATTGGTCAAGCTATTGGAATTAGCCAGAGAGAATGAAGCAACTTCATTAAC
TGAAAGAGGGATCTTGGATCTCAATTTACGCAACAGTCTCATTGACAAGCAGAACTACCATGATGAACTT
TCTCGTAAGCAAAGAGAGAAAGAACGAGATTTTCGAAATTTAAGAAAGATGGAACTGCTCTTGAAAGTGT
CCTGGGATGCACTTAGGCAAACTCAAGCACTGCATCAAAGGCTTCTATTAGAGATGGAAGCTATCCCCAA
AGATGATTCTACATTATCTGAGAGAAGGCGAGAGCTTCACAAGGAAGTTGAAGTAGCTAAGAGGAATTTG
GCCCAACAGAAAATTATATCAGAAATGGAGTCTAAGTTAGTAGAACAACAACTTGCAGAAGAAAACAAGC
TTTTAAAGGAGCAAGAAAACATGAAAGAGCTAGTAGTCAACCTTCTCCGCATGACTCAAATCAAAATTGA
TGAAAAGGAACAAAAGTCCAAGGATTTCCTGAAAGCTCAGCAAAAATACACCAACATTGTTAAAGAAATG
AAAGCAAAGGATCTTGAAATCAGGATACACAAGAAGAAAAAATGTGAAATTTATCGGAGACTGAGAGAGT
TTGCTAAACTGTATGACACCATTCGAAATGAAAGAAACAAATTTGTTAACTTACTCCACAAAGCTCATCA
GAAAGTAAATGAAATAAAAGAAAGGCATAAAATGTCATTAAATGAACTTGAAATTCTGAGAAATAGTGCC
GTTAGTCAAGAAAGAAAGCTACAAAATTCCATGCTGAAACACGCCAACAATGTTACCATCAGAGAGAGCA
TGCAAAACGATGTGCGCAAAATTGTATCAAAACTTCAGGAAATGAAAGAAAAGAAGGAAGCCCAGTTAAA
TAACATTGACAGACTTGCCAACACGATCACAATGATCGAAGAGGAGATGGTGCAGCTTCGCAAAAGATAC
GAAAAAGCTGTTCAGCATCGAAATGAAAGTGGCGTTCAGCTGATAGAGCGGGAAGAAGAAATATGCATTT
TTTATGAAAAAATAAATATCCAAGAGAAGATGAAACTAAATGGAGAAATTGAAATACATCTACTGGAAGA
AAAGATCCAATTCCTGAAAATGAAGATTGCTGAGAAGCAAAGACAAATTTGTGTGACCCAGAAATTACTG
CCAGCCAAGAGGTCCCTGGATGCCGACCTAGCTGTGCTCCAAATTCAGTTTTCACAGTGTACAGACAGAA
TTAAAGACCTGGAGAAACAGTTCGTAAAGCCTGATGGTGAGAATAGAGCTCGCTTCCTTCCAGGGAAAGA
TCTGACCGAAAAAGAAATGATCCAAAAATTAGACAAGCTGGAACTACAACTGGCCAAGAAGGAGGAGAAG
CTGCTGGAGAAGGATTTCATCTATGAGCAGGTCTCCAGGCTCACAGACAGGCTCTGCAGCAAAACTCAGG
GCTGCAAGCAGGACACACTGCTCTTAGCCAAGAAGATGAATGGCTATCAAAGAAGGATCAAAAATGCAAC
TGAGAAAATGATGGCTCTTGTTGCTGAGCTGTCCATGAAACAAGCCCTAACCATTGAACTCCAAAAGGAA
GTCAGGGAGAAAGAAGACTTCATCTTCACTTGCAATTCCAGGATAGAAAAAGGTCTGCCACTCAATAAGG
AAATTGAGAAAGAATGGTTGAAAGTCCTTCGAGATGAAGAAATGCACGCCTTGGCCATCGCTGAAAAGTC
TCAGGAGTTCTTGGAAGCAGATAATCGCCAGCTGCCCAATGGTGTTTACACAACTGCAGAGCAGCGTCCG
AATGCCTACATCCCAGAAGCAGATGCCACTCTTCCTTTGCCAAAACCTTATGGTGCTTTGGCTCCTTTTA
AACCCAGTGAACCTGGAGCCAATATGAGGCACATAAGGAAACCTGTTATAAAGCCAGTTGAAATCTGA

Translation (955 aa):
MEDSSTDTEKEEEEEKDEKDQEPIYAIVPTINIQDERFVDLSETPAFIFLHELHAMGKLPGTRMAALKAK
YTLLHDAVMSTQESEVQLLQNAKRFTEQIQQQQFHLQQADNFPEAFSTEVSKMREQLLKYQNEYNAVKER
EFHNQYRLNSLKEEKIIIVKEFEKITKPGEMEKKMKILRESTEELRKEIMQKKLEIKNLREDLASKQKQL
LKEQKELEELLGHQVVLKDEVAHHQTIPVQIGKEIEKITRKKVEMEKKKIVLEQEVKTLNDSLKKVENKV
SAIVDEKENVIKEVEGKRALLEIKEREHNQLVKLLELARENEATSLTERGILDLNLRNSLIDKQNYHDEL
SRKQREKERDFRNLRKMELLLKVSWDALRQTQALHQRLLLEMEAIPKDDSTLSERRRELHKEVEVAKRNL
AQQKIISEMESKLVEQQLAEENKLLKEQENMKELVVNLLRMTQIKIDEKEQKSKDFLKAQQKYTNIVKEM
KAKDLEIRIHKKKKCEIYRRLREFAKLYDTIRNERNKFVNLLHKAHQKVNEIKERHKMSLNELEILRNSA
VSQERKLQNSMLKHANNVTIRESMQNDVRKIVSKLQEMKEKKEAQLNNIDRLANTITMIEEEMVQLRKRY
EKAVQHRNESGVQLIEREEEICIFYEKINIQEKMKLNGEIEIHLLEEKIQFLKMKIAEKQRQICVTQKLL
PAKRSLDADLAVLQIQFSQCTDRIKDLEKQFVKPDGENRARFLPGKDLTEKEMIQKLDKLELQLAKKEEK
LLEKDFIYEQVSRLTDRLCSKTQGCKQDTLLLAKKMNGYQRRIKNATEKMMALVAELSMKQALTIELQKE
VREKEDFIFTCNSRIEKGLPLNKEIEKEWLKVLRDEEMHALAIAEKSQEFLEADNRQLPNGVYTTAEQRP
NAYIPEADATLPLPKPYGALAPFKPSEPGANMRHIRKPVIKPVEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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