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Report for CCDS89202.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89202.1 Public Mus musculus 18 Fhod3 23 108 98 CCDS HistoryNCBI Gene:225288Re-query CCDS DB by CCDS ID:89202.1Re-query CCDS DB by GeneID:225288See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89202.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000234526.1 ENSMUSP00000157193.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000234526.1Link to Ensembl Protein Viewer:ENSMUSP00000157193.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000234526Re-query CCDS DB by Protein ID:ENSMUSP00000157193
Original member Current member NCBI NM_001289655.1 NP_001276584.1 Accepted alive Link to Nucleotide Sequence:NM_001289655.1Link to Protein Sequence:NP_001276584.1Re-query CCDS DB by Nucleotide ID:NM_001289655Re-query CCDS DB by Protein ID:NP_001276584Link to BLAST:NP_001276584.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276584.1 1546 Q76LL6-4 1546 100% 0 0

Chromosomal Locations for CCDS 89202.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 24709609 24709773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24754219 24754325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24770483 24770547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24897637 24897704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24903893 24903998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24969160 24969254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24985214 24985325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24989973 24990067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 24994416 24994559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25001791 25002032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25022622 25022978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25028065 25028169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25056260 25056394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25060326 25060376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25066217 25066425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25085334 25085612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25090030 25090907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25101526 25101684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25110055 25110237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25112546 25112665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25113510 25113671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25115699 25115889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25120119 25120311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25125743 25125917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25130533 25130694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 25132911 25132993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4641 nt):
ATGGCCACGCTGGCTTGTCGCGTGCAGTTCTTGGACGACACCGATCCTTTCAACAGCACCAACTTCCCAG
AG
CCAAGCCGGCCACCGCTGTTCACATTCCGCGAGGACCTGGCTCTGGGCACCCAGTTGGCCGGGGTCCA
T
CGGCTGCTGCGGGCGCCGCACAAGCTCGATGACTGTACCCTGCAGCTGTCCCACAATGGCGCCTACCTG
GAT
CTGGAGGCCACGCTGGCGGAACAGCGGGATGAGCTAGAAGGCTTCCAGGATGACACAGGGCGGGGCA
AG
AAGAACAGCATTATTCTGAGGACACAGCTGTCTGTGAGGGTCCATGCCTGCATTGAAAAGCTGTACAA
C
TCCAGTGGCCGAGATCTAAGAAGGGCCCTTTTCTCACTGAAGCAGATATTTCAGGATGACAAGGATTTG
GTG
CATGAATTTGTCATAGCTGAAGGTCTGACCTGTTTGATCAAAGTGGGAGCCGAGGCGGATCAGAACT
AT
CAGAACTACATCCTGAGGGCTCTGGGTCAGATTATGTTGTATGTGGATGGGATGAATGGCGTCATCAA
C
CACAGCGAGACCATCCAGTGGCTTTACACGCTCGTTGGGTCGAAGTTCCGCCTGGTAGTGAAGACAGCC
CTG
AAGCTTCTTCTGGTCTTTGTGGAGTATTCTGAGTCCAATGCACCACTTCTCATTCAGGCCGTTTCTG
CT
GTCGACACCAAAAGAGGTGTCAAACCCTGGTCCAACATCATGGAAATCTTGGAGGAAAAAGATGGAGT
T
GACACAGAGCTATTGGTTTATGCAATGACTCTAGTGAACAAGACACTGGCAGGACTGCCAGATCAAGAC
ACC
TTCTATGACGTAGTAGACTGCCTGGAAGAGCTGGGCATCGCCGCTGTGTCCCAAAGGCACTTGAACA
AG
AAAGGGACAGACCTGGACTTGCTGGAGCAGTTTAATATCTATGAGGTGGCACTCAGGCATGAAGATGG
T
GATGAGACAGCTGAGCCACCCCCCAGTGGGCACCGGGACCGGAGGAGGGCCAGCATGTGTTCTGGTGGC
ACT
GTGGGTGAGCAACAGGGCCTTGACCGCAGAAGGAGCCGTAGACACTCAATCCAGAATATCAAGAGCC
CA
CTGTCAGCTCCCACCAGCCCCTGCTCCCCGTCTGTTCCTGCCTTCAAACCCAGCCAAGTTCGAGACCT
C
TGTGAAAACAAGGCCAGCTCTGCCTCCGGTCAGAGCTCCCCTGGGAAGGATGCTGCTCCTGAGAGTTCT
GCA
CTCCATACCACCTCAAGTCCCACCTCACAGGGAAGGTGGCTTTCTGCCAGCACAGCAGCACGGAGCC
CT
GTGCTTGGTGGGACCTCTGGGCCTGAGGCCAGCCGGCCTGCTGCTCGCTTGCTACCTCCCAGCCCTGG
C
TTGGCCACTCGGCCCTCCACAGCACCAAAGGTGTCTCCAACCATAGACAAGCTGCCCTACGTGCCCCAC
AGC
CCCTTCCACCTCTTCTCCTATGACTTTGAAGATTCACCCCTCCTCACCAAGGACAAGGGAGGAGACT
CT
CAGACAGAAAACAGATACAGCAATTTCAGCAGCAACTCTTTCCAATCCTCCAGACCCTCTCCTGGACC
T
AGTGGGTCCCCATCTTATGCATCATCCTTCTCATCCCCACAGGATACCAGGTCATCGCCAAGTGGCCTT
CTC
ACATCCTCGTTCAGGCAGCACCAAGAGTCACTGGCAGCAGAGAGAGAGCGGAGGCGGCAAGAGAGAG
AG
GAAAGACTGCAGAGGATAGAACGGGAAGAAAGGAACAAATTCAACCGGGAATATCTAGACAAAAGGGA
G
GAGCAAAGGCAAGCAAGAGGAGAAAGATACAAATACTTGGAGCAGTTGGCAGCCGAGACGCAGGAGAAG
GAG
CCTAGAAGCCAGAGCGTGAGCCGGGGTAGAGCTGACCTCTCCTTGGACCTGAGCTTGCCTGCAGCCC
CT
GCTCCACCTTCCCCTTCAAGCCAGAGTCCCTCTGCTGACTCACAAGAGGCTCTCCCTGTGCCTTCATC
C
CCACCCACTCTGCAGTGCCCCCAAGTAAGTGGTAAGGACCACGAGCCTGAACTGGAGGCAGAAGCTGGG
CAA
GGTGCTGATGAAGCCAGCCAGGATATAGCATCTGCCCACAGGGGAGCAGAGAGCCAAGAAGAGCCGG
TG
CTGGAGCTAGAGCCAGAGGAAAGAGCTTCACTGAGTGAAAAAGAGAGGCAAAACGAAGAGGTGAATGA
G
AGGGACAACTGTTCTGCTTCCAGCATCTCGTCCTCCAGCAGCACCTTGGAGAGGGAAGAGAAGGAAGAC
AAA
CTGTCTGAAGACAGGGCGACCGGTTTGTGGTCCACCAGCCTTCAGGATGTGGGTGTGAATGGACAGT
GT
GGTGACATCCTTACCAGCAAAAGGTTCATGCTGGACATGCTGTATGCCCATAACAGAAAATCCACAGA
A
GATGAGGAAAAAGATGACGGCGAGCCTGGGAGGTCTGCGCAGGAGGTGGAGGCAGTGGCCAGCCTCGCC
ACC
AGGATATCCACTCTGCAGGCCAACTCTCAGGCCCCAGAGGAGAGCATCAAGAGGGTGGACATTGGCT
GT
CTAGACAACCGGGGCAGTGTGAAGGCATTTGCTGAGAAATTCAACAGTGGAGAAGTAGGGAGGGGTGC
C
ATCTCTCCTGATGTGGAGTCTCAGGACAAGGTCCCGGATACACCCCCAGCACAGCTGAAGACTGAGTCT
GAT
TACATCTGGGACCAGCTCATGGCCAATCCGAGGGAGCTCAGAATCCAAGACATGGATTTCACAGACC
TA
GGGGAGGAGGACGATATCGATGTTTTGGATGTGGATCTTGGCCACCGGGAAGCCCCAGGGCCACCCCC
T
CCACCCCCTCCCACCTTCCTGGGTTTGCCACCCCCACCCCCTCCACCCCTGTTGGACAGCGTGCCTCCC
CCA
CCAGTCCCCGGTAATTTATTGGCTTCTCCTGTGTTCAACACTCCTCAGGGCTTAGGGTGGTCCCAGG
TA
CCCAGGGGTCAGCCAGCGTTCACCAAGAAAAAGAAGACGATCCGGCTGTTCTGGAACGAAGTCCGGCC
C
TTTGAGTGGCCAAGTAAGAACAATCGCCGGTGCAGGGAATTCCTGTGGTCAAAACTGGAACCCATTAAG
GTG
GACACTTCCAGACTCGAGCACCTGTTTGAGTCCAAGTCTAAGGAGCTGTCTGTCACCAAGAAAACGG
CT
GCAGATGGTAAACGGCAGGAGATCATTGTTCTGGATTCCAAGAGGAGCAATGCCATCAACATCGGCCT
G
ACGGTGCTGCCCCCTCCAAGGACAATTAAGATAGCCATTTTGAACTTTGATGAGTATGCCTTAAACAAA
GAA
GGGATCGAGAAAATTCTGACCATGATTCCAACTGAAGAGGAGAAGCAGAAAATCCAGGAGGCTCAGC
TG
GCTAACCCGGAAGTGCCGTTGGGCAGTGCAGAGCAGTTCCTTCTCACACTCTCTTCCATCAGTGAGCT
C
TCGGCTCGGCTCCACCTGTGGGCATTCAAAATGGATTATGAAACCACAGAAAAGGAAGTGGCCGAACCA
CTT
TTGGACCTGAAGGAAGGAATAGACCAGTTGGAGAACAATAAGACTCTGGGCTTCATCCTGTCTACTC
TC
CTTGCCATTGGGAACTTTCTAAATGGAACTAATGCCAAAGCATTTGAGTTAAGCTACCTCGAGAAGGT
T
CCAGAAGTCAAAGATACAGTGCACAAGCAGTCTCTTCTCCACCACGTGTGCACCATGGTAGTGGAAAAC
TTT
CCGGACAGCTCGGATCTGTACTCAGAGATTGGGGCCATCACTAGGTCAGCCAAGGTTGACTTTGATC
AA
CTTCAGGATAATTTATGTCAGATGGAGAGACGCTGCAAAGCTTCATGGGACCACCTCAAGGCGATTGC
A
AAACACGAGATGAAGCCTGTTTTGAAACAGCGGATGTCAGAGTTCCTAAAAGACTGTGCAGAGCGAATT
ATA
ATTTTAAAGATCGTCCATCGGAGGATAATTAACAGATTTCACTCATTTTTACTGTTTATGGGCCATC
CC
CCTTATGCAATTCGAGAGGTGAACATCAACAAGTTCTGCAGGATCATCAGTGAGTTTGCCCTGGAGTA
T
CGCACGACCAGGGAAAGGGTTCTACAGCAGAAACAGAAGCGGGCCAACCACAGAGAGAGAAACAAGACC
AGA
GGGAAGATGATCACTGACTCTGGCAAGTTCTCTGGCAGTTCTCCAGCAGCACCGAGCCAGCCACAGG
GT
CTGAGCTATGCTGAGGATGCAGCCGAACATGAGAACATGAAGGCCGTGTTGAAAACCTCCTCCCCTGC
G
CTGGAGGACGCCACCCCAGTGCTTGGTGTCCGCACTCGCAGCCGGGCAAGCCGAGGATCCACTAGTTCA
TGG
ACTATGGGAACTGAGGAGTCACCTAGTGTCACTGATGATGCGGCTGATGAGATCATGGACCGCATTG
TC
AAATCAGCCACCCAAGTGCCCAGTCAGAGAGTGGTGCCACGGGAGAGAAAGCGTTCCAGGGCCAACCG
C
AAATCTTTGCGAAGGACCTTGAAGAGTGGCCTGACTCCAGAAGAAGCCAGAGCCCTGGGCCTGGTTGGC
ACA
TCTGAACTGCAACTGTGA


Translation (1546 aa):
MATLACRVQFLDDTDPFNSTNFPEPSRPPLFTFREDLALGTQLAGVHRLLRAPHKLDDCTLQLSHNGAYL
D
LEATLAEQRDELEGFQDDT
GRGKKNSIILRTQLSVRVHACIEKLYNSSGRDLRRALFSLKQIFQDDKDL
V
HEFVIAEGLTCLIKVGAEADQNYQNYILR
ALGQIMLYVDGMNGVINHSETIQWLYTLVGSKFRLVVKTA
L
KLLLVFVEYSESNAPLLIQAVSAVDTKR
GVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLAGLPDQD
T
FYDVVDCLEELGIAAVSQRHLNKKGTDLDLLEQFNIYE
VALRHEDGDETAEPPPSGHRDRRRASMCSGG
T
VGEQQGLDRRRSRRHSIQNIKSPLSAPTSPCSPSVPAFKPSQVRDLCE
NKASSASGQSSPGKDAAPESS
A
LHTTSSPTSQGRWLSASTAARSPVLGGTSGPEASRPAARLLPPSPGLATRPSTAPKVSPTIDKLPYVPH
S
PFHLFSYDFEDSPLLTKDKGGDSQTEN
RYSNFSSNSFQSSRPSPGPSGSPSYASSFSSPQDTRSSPSGL
L
TSSFRQHQESLAAERERRRQEREERLQRIEREERNKF
NREYLDKREEQRQARGERYKYLEQLAAETQEK
E
PRSQSVSRGRADLSLDLSLPAAPAPPSPSSQSPSADSQEALPVPSSPPTLQCPQ
VSGKDHEPELEAEAG
Q
GADEASQDIASAHRGAESQEEPVLELEPEERASLSEKERQNEEVNERDNCSASSISSSSSTLEREEKED
K
LSEDRAT
GLWSTSLQDVGVNGQCGDILTSKRFMLDMLYAHNRKSTEDEEKDDGEPGRSAQEVEAVASLA
T
RISTLQANSQAPEESIKRVDIGCLDNRGSVKAFAEKFNSGEVGRGAISPDVESQDKVPDTPPAQLKTES
D
YIWDQLMANPRELRIQDMDFTDLGEEDDIDVLDVDLGHREAPGPPPPPPPTFLGLPPPPPPPLLDSVPP
P
PVPGNLLASPVFNTPQGLGWSQVPRGQPAFTKKKKTIRLFWNEVRPFEWPSKNNRRCREFLWSKLEPIK
V
DTSRLEHLFESKSKELSVTK
KTAADGKRQEIIVLDSKRSNAINIGLTVLPPPRTIKIAILNFDEYALNK
E
GIE
KILTMIPTEEEKQKIQEAQLANPEVPLGSAEQFLLTLSSISELSARLHLWAFKMDYETTEKEVAEP
L
LDLKEGIDQLENNKTLGFILSTLLAIGNFLNGTN
AKAFELSYLEKVPEVKDTVHKQSLLHHVCTMVVEN
F
PDSSDLYSEIGAITRSAK
VDFDQLQDNLCQMERRCKASWDHLKAIAKHEMKPVLKQRMSEFLKDCAERI
I
ILKIVHRRIIN
RFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYRTTRERVLQQKQKRANHRERNKT
R
GKMITD
SGKFSGSSPAAPSQPQGLSYAEDAAEHENMKAVLKTSSPALEDATPVLGVRTRSRASRGSTSS
W
TMGTEESPSVTDDAADEIMDRIVKSATQVPSQRVVPRERKRSRANRKS
LRRTLKSGLTPEEARALGLVG
T
SELQL




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser