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Report for CCDS89134.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89134.1 Public Mus musculus 17 Tmem232 23 108 98 CCDS HistoryNCBI Gene:381107Re-query CCDS DB by CCDS ID:89134.1Re-query CCDS DB by GeneID:381107See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89134.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000233117.1 ENSMUSP00000156833.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000233117.1Link to Ensembl Protein Viewer:ENSMUSP00000156833.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000233117Re-query CCDS DB by Protein ID:ENSMUSP00000156833
Original member Current member NCBI NM_001289486.1 NP_001276415.1 Accepted alive Link to Nucleotide Sequence:NM_001289486.1Link to Protein Sequence:NP_001276415.1Re-query CCDS DB by Nucleotide ID:NM_001289486Re-query CCDS DB by Protein ID:NP_001276415Link to BLAST:NP_001276415.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276415.1 674 Q5K6N0-3 674 100% 0 0

Chromosomal Locations for CCDS 89134.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 65256369 65256605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65265204 65265297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65382422 65382654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65402828 65403006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65430779 65431031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65436263 65436386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65450289 65450443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65476618 65476775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65478369 65478468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65484377 65484531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65485864 65485969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65486472 65486583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65500078 65500196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2025 nt):
ATGAAAGCTTATAAGCCACCTGTGGTCAATAAGTTTGGAGTAATATCTTCCACTTATCATGAAGAACTCC
TGAAATCTATTTTTGAAAGTTCAAACAGAAGAAAGAGTCAAAAACCAAAGCCATCATTTTCAATTTCCAA
AGAATTCATATTGAGATTCAACCACACAGATAATCCAGCAGAGGAGGAAGAACTGTTGGAACAAGCCAGG
AGACTCATCGTCAGGTCTAAGAGGAAGTTGGGCCTCAAGACACTGGGCTCTGGGAAGCATGTGCATCTTC
CGACCGCATGGGCTGAGGTCATCTATCTGGCTCAGTGCAAAGGGGAGATCCAAGATGCTTTAAATATGCT
CCACGCCTCCTTGGACCATGTCTCCTTTGATCACGATCAGCTTCCTGCCCTGTTTTTTCTCGCGGAATCC
GTTTTATATCGACTCTGTTGCGATGCATTCATGAAGGGATATTTATATTCAGTTGAGATAAAACTGGTGA
AGATTGGCTATTTGATCTTCTTACGGCTTTTTGTATTCTTCCTGCATGGTCACTTAGAAAGCTTTAAACA
ACATTTGCTTAGGCTGCAGCCATATTTATACGCACTTCATTTCTCGGAACCGTCCTACTACAAGTATCCG
AACATCATCTCCAACGTGCAGTTCATCCTGAAAACATCGGAAATTATCTGTAAAAGAGAGCTTCATTCTG
AACCATTCGTGGAAAGCCCAGATGAAACTGAGGATCCATATTCTGACCTGAATCATTTGCAGCTGAATAA
GAGGGGCTACGAAGTCAACCACCTGCTCTGGCACAGTGTGGCCGCCTGGTCCTGCGTTCAGAACAATCGT
CCTCAGCTCACCGAAGTGCTGGAACACCTCCTCTTCTACAAAACGCAGCTTCAGACGAAATGCTGGTTGG
ATTCAGCCCTGGCTTTGATGGTCCTGGGGGAAGCTGCTAAGCTGGACATGGCCTGCTTGAAAACACTGAT
GGACCTAGTGACAGATTTCCTTGAGAACATCTTGTCTGCTCAGAACCAGGAAGAGAACTATAATATATAT
GATACTTCCTGGGCCTCAGAGATTGTATTCACATATACAACAATTATTGCAGAAGTCTGTCTGTATGCAG
CTACCTCTGACCTGAGGAAAACAGCTTTGATTGGGTTCTGTGCCTGTAAAAGTCCGCAGCAAGGTATTTC
CCTCACAGACAAGTCTGAAGAGCTGCCAGAGTTGGATGGCGCAAGCATTTTAACTCTTCTGAAGTATTTC
TCTTCCAGAATCTCTGATAACTGTGAGAAGGTGATCTGGATTGGATACTATGGCATAGTGTATAACCTGG
TGAAGATGTCATGGGAACTTCAGGGTGAGCAGGATCAGGATGGACTTAGAAACATGATATGGCAAACACT
GCAAAAGATAAAGGATTATGAGCAAGACCCACGGATCCGATGTGCATTAGTTATAGCCCAGGCCGAATTA
AATGGCCCATCTGACCCTTTCTGCACAAAGGCCACACCAAACTCAGGAGAAGAAGTTTTCTCCAAGTACA
TCGGGTGGAGAATCGCTACTACTCTCTCCAGACTCTTTTTCCCCTCTCTCGATGTTGCCCCTCCAAAGAC
GCCAGTGGAAGTGGACCTGCCAAGAAAACACACCATCAGAGAACGCCAGCCTGCAAAAAAGAGAGTTCTG
CGCTTTATCTTGAAGGATCATTCTTCTGTGGTAGAAGTTTCCATGACTCCGTATCCAAATTTCTTCACCA
AGGCAGATAAGAAATTGGAAGAAATCATTGATCATCATTGGCAGAAAGATATGGAGGCCCGAAAGCGAGA
AGAGGAAGCATATAAGGCCCAAAATCAGAAGGACAAGGAGGAAAAGGAGAAGATTCACTTTCAAGAAATT
ATGAAGCAAAGAGAACGGAAACTGAACAAACAAACCAAACCCTATGAAATAATTCTGTCAGAAAAAGAAA
GTGGCTCAGAAAAGAAATGTGGGTTCTTCGAGCTGAAACCCAGCACCGCACCAAATGCTAAGTGA

Translation (674 aa):
MKAYKPPVVNKFGVISSTYHEELLKSIFESSNRRKSQKPKPSFSISKEFILRFNHTDNPAEEEELLEQAR
RLIVRSKRKLGLKTLGSGKHVHLPTAWAEVIYLAQCKGEIQDALNMLHASLDHVSFDHDQLPALFFLAES
VLYRLCCDAFMKGYLYSVEIKLVKIGYLIFLRLFVFFLHGHLESFKQHLLRLQPYLYALHFSEPSYYKYP
NIISNVQFILKTSEIICKRELHSEPFVESPDETEDPYSDLNHLQLNKRGYEVNHLLWHSVAAWSCVQNNR
PQLTEVLEHLLFYKTQLQTKCWLDSALALMVLGEAAKLDMACLKTLMDLVTDFLENILSAQNQEENYNIY
DTSWASEIVFTYTTIIAEVCLYAATSDLRKTALIGFCACKSPQQGISLTDKSEELPELDGASILTLLKYF
SSRISDNCEKVIWIGYYGIVYNLVKMSWELQGEQDQDGLRNMIWQTLQKIKDYEQDPRIRCALVIAQAEL
NGPSDPFCTKATPNSGEEVFSKYIGWRIATTLSRLFFPSLDVAPPKTPVEVDLPRKHTIRERQPAKKRVL
RFILKDHSSVVEVSMTPYPNFFTKADKKLEEIIDHHWQKDMEARKREEEAYKAQNQKDKEEKEKIHFQEI
MKQRERKLNKQTKPYEIILSEKESGSEKKCGFFELKPSTAPNAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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