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Report for CCDS75010.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75010.1 Public Homo sapiens 3 CPNE4 24 110 108 CCDS HistoryNCBI Gene:131034Re-query CCDS DB by CCDS ID:75010.1Re-query CCDS DB by GeneID:131034See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75010.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000502818.5 ENSP00000421646.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000502818.5Link to Ensembl Protein Viewer:ENSP00000421646.1Re-query CCDS DB by Nucleotide ID:ENST00000502818Re-query CCDS DB by Protein ID:ENSP00000421646
Original member Current member EBI ENST00000512332.5 ENSP00000424853.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000512332.5Link to Ensembl Protein Viewer:ENSP00000424853.1Re-query CCDS DB by Nucleotide ID:ENST00000512332Re-query CCDS DB by Protein ID:ENSP00000424853
Original member Current member EBI ENST00000617767.5 ENSP00000478878.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617767.5Link to Ensembl Protein Viewer:ENSP00000478878.1Re-query CCDS DB by Nucleotide ID:ENST00000617767Re-query CCDS DB by Protein ID:ENSP00000478878
Original member Current member NCBI NM_001289112.2 NP_001276041.1 Accepted alive Link to Nucleotide Sequence:NM_001289112.2Link to Protein Sequence:NP_001276041.1Re-query CCDS DB by Nucleotide ID:NM_001289112Re-query CCDS DB by Protein ID:NP_001276041Link to BLAST:NP_001276041.1
Original member Current member NCBI NM_153429.2 NP_702907.1 Accepted alive Link to Nucleotide Sequence:NM_153429.2Link to Protein Sequence:NP_702907.1Re-query CCDS DB by Nucleotide ID:NM_153429Re-query CCDS DB by Protein ID:NP_702907Link to BLAST:NP_702907.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276041.1 575 Q96A23-2 575 100% 0 0
NP_702907.1 575 Q96A23-2 575 100% 0 0

Chromosomal Locations for CCDS 75010.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 131535195 131535329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131542557 131542793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131549947 131550080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131552440 131552491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131555497 131555551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131564216 131564349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131575071 131575130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131581579 131581665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131587484 131587582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131669675 131669764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131685875 131685958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131696542 131696616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131699909 131699980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131723446 131723625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 131905264 131905444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 132037557 132037609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1728 nt):
ATGGCTGTAGAACCCAGCAGCTCAGAATCCATTAAAAGGAGAGCTGGGAGGAGAATGAAGAAGATGAGCA
ACATTTATGAGTCCGCTGCCAACACACTGGGAATCTTTAACAGCCCCTGCCTGACCAAAGTTGAGCTGCG
TGTGGCGTGCAAAGGCATTTCTGACAGAGATGCCCTTTCCAAACCAGACCCCTGTGTCATCCTCAAGATG
CAGTCTCATGGGCAGTGGTTTGAGGTTGACAGGACTGAGGTGATTCGCACCTGCATAAACCCAGTGTACT
CAAAACTGTTTACTGTGGACTTTTACTTTGAGGAGGTGCAGCGCCTGCGGTTTGAAGTCCATGACATCAG
CAGCAACCACAATGGGCTGAAGGAGGCCGACTTCCTTGGTGGCATGGAGTGCACACTTGGCCAGATTGTT
TCCCAGAGAAAGCTGTCCAAATCCTTGCTGAAGCATGGGAACACAGCAGGGAAATCTTCCATCACGGTGA
TTGCTGAAGAATTATCTGGCAATGACGACTATGTTGAGCTTGCATTCAATGCACGGAAATTGGATGACAA
GGATTTCTTCAGTAAATCTGACCCATTTCTGGAAATTTTTCGTATGAATGATGATGCAACTCAGCAGCTG
GTGCACCGAACTGAGGTTGTGATGAATAACTTAAGCCCAGCCTGGAAATCATTCAAAGTATCTGTAAATT
CTCTATGCAGCGGAGACCCAGACCGCCGGCTAAAGTGCATAGTATGGGACTGGGACTCCAATGGCAAGCA
TGACTTCATTGGAGAATTCACCTCGACATTCAAGGAGATGAGAGGAGCAATGGAAGGGAAACAGGTGCAG
TGGGAGTGCATCAATCCCAAGTACAAAGCCAAGAAGAAGAATTACAAGAACTCAGGCACTGTGATTCTGA
ATCTGTGCAAGATTCACAAGATGCATTCTTTCTTGGACTACATCATGGGTGGCTGCCAAATCCAGTTTAC
AGTAGCTATAGATTTCACTGCCTCAAACGGGGACCCCAGGAACAGCTGTTCCTTGCACTACATCCACCCT
TACCAACCCAATGAGTATCTGAAAGCTTTGGTAGCTGTGGGGGAGATTTGCCAAGACTATGACAGTGACA
AAATGTTCCCTGCCTTTGGGTTTGGCGCCAGGATACCTCCAGAGTACACGGTCTCTCATGACTTTGCAAT
CAACTTTAATGAAGACAACCCAGAATGTGCAGGAATTCAAGGAGTTGTGGAAGCCTATCAGAGCTGTCTT
CCTAAGCTCCAACTCTACGGTCCCACCAACATTGCCCCCATCATCCAGAAGGTTGCCAAGTCAGCGTCAG
AGGAAACTAACACCAAGGAGGCATCGCAATACTTCATCCTGCTGATCCTGACAGATGGTGTTATCACAGA
CATGGCCGACACCCGGGAGGCCATTGTCCATGCCTCCCACCTCCCCATGTCAGTCATCATCGTGGGAGTA
GGGAACGCTGACTTCAGTGACATGCAGATGCTGGACGGTGATGATGGGATTCTGAGGTCACCCAAGGGAG
AGCCTGTTCTTCGAGACATCGTCCAGTTCGTGCCCTTCAGGAACTTCAAACACGCATCTCCAGCTGCCCT
GGCAAAGAGCGTGCTGGCTGAAGTCCCAAACCAAGTTGTGGACTATTACAATGGCAAAGGAATTAAACCA
AAATGTTCATCAGAAATGTATGAATCTTCCAGAACACTAGCACCATGA

Translation (575 aa):
MAVEPSSSESIKRRAGRRMKKMSNIYESAANTLGIFNSPCLTKVELRVACKGISDRDALSKPDPCVILKM
QSHGQWFEVDRTEVIRTCINPVYSKLFTVDFYFEEVQRLRFEVHDISSNHNGLKEADFLGGMECTLGQIV
SQRKLSKSLLKHGNTAGKSSITVIAEELSGNDDYVELAFNARKLDDKDFFSKSDPFLEIFRMNDDATQQL
VHRTEVVMNNLSPAWKSFKVSVNSLCSGDPDRRLKCIVWDWDSNGKHDFIGEFTSTFKEMRGAMEGKQVQ
WECINPKYKAKKKNYKNSGTVILNLCKIHKMHSFLDYIMGGCQIQFTVAIDFTASNGDPRNSCSLHYIHP
YQPNEYLKALVAVGEICQDYDSDKMFPAFGFGARIPPEYTVSHDFAINFNEDNPECAGIQGVVEAYQSCL
PKLQLYGPTNIAPIIQKVAKSASEETNTKEASQYFILLILTDGVITDMADTREAIVHASHLPMSVIIVGV
GNADFSDMQMLDGDDGILRSPKGEPVLRDIVQFVPFRNFKHASPAALAKSVLAEVPNQVVDYYNGKGIKP
KCSSEMYESSRTLAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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