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Report for CCDS21736.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21736.1 Public Mus musculus 7 Akip1 23 108 98 CCDS HistoryNCBI Gene:57373Re-query CCDS DB by CCDS ID:21736.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21736.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033335.5 ENSMUSP00000033335.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033335.5Link to Ensembl Protein Viewer:ENSMUSP00000033335.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000033335Re-query CCDS DB by Protein ID:ENSMUSP00000033335
Original member Current member NCBI NM_020616.2 NP_065641.1 Accepted alive Link to Nucleotide Sequence:NM_020616.2Link to Protein Sequence:NP_065641.1Re-query CCDS DB by Nucleotide ID:NM_020616Re-query CCDS DB by Protein ID:NP_065641Link to BLAST:NP_065641.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065641.1 212 Q9JJR5 212 100% 0 0

Chromosomal Locations for CCDS 21736.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 109703952 109704170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109704951 109705031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109707398 109707511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109708941 109709021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109711750 109711893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (639 nt):
ATGGAATACTGTCTGGCGGCCGCGGCGCTGAACGGAGTGGACCGGCGCTCGCTCCAGCGCTCTGCTCGGC
TGGGGAGGGAAGTATTGGAGCGCGCCAAGAGGAGGGCAGTGGACTGGCATTCTCCAGAGCGATCCAGAGG
CAACGTGGGGGTCCTTTACCGCCAGGGCCCCTACCAGGAAAGATGGTCGGTCCCTGGTTCCCAGCGCCTC
CTAGGAGAGAGAGAAGAAAGGTGCCCAACCCTTAGCTCTTCCTTCGGAGCAATGGCTGAATTCATGGACT
ATACTTCAAGTCAGTGTGGGAAATACTACTTGTCTATGCCAGAGGAAGGAGGAGCAACCCATGTCTACCG
TTATCACAGAAGGAAACCTCCAGAGATGCACATGTACTCAGATACTGGGCACAGTCAGGAACAAAGAAAC
TGCAGAGGCGAGACATCTGTTGGACAAGAAAGCATCTACCAAACATCAGAGCATTCTCAAGAGTCCTCTT
GGCCTACTGAGAACATCTCTAAGGACCTCTACATCGAAGTCTACCCAGGGACCTATTCTGTCACTGTGGG
CTCCAGTGCCTTATCCAAGAAGACGCACGTGGTTGCAGTTGACCCCGGGCAAAGTGTGGACTTGGTCTTC
CCCGTGTGA

Translation (212 aa):
MEYCLAAAALNGVDRRSLQRSARLGREVLERAKRRAVDWHSPERSRGNVGVLYRQGPYQERWSVPGSQRL
LGEREERCPTLSSSFGAMAEFMDYTSSQCGKYYLSMPEEGGATHVYRYHRRKPPEMHMYSDTGHSQEQRN
CRGETSVGQESIYQTSEHSQESSWPTENISKDLYIEVYPGTYSVTVGSSALSKKTHVVAVDPGQSVDLVF
PV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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