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Report for CCDS28637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28637.1 Public Mus musculus 17 Wdr46 23 108 98 CCDS HistoryNCBI Gene:57315Re-query CCDS DB by CCDS ID:28637.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 28637.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025170.10 ENSMUSP00000025170.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025170.10Link to Ensembl Protein Viewer:ENSMUSP00000025170.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000025170Re-query CCDS DB by Protein ID:ENSMUSP00000025170
Original member Current member NCBI NM_020603.2 NP_065628.1 Accepted alive Link to Nucleotide Sequence:NM_020603.2Link to Protein Sequence:NP_065628.1Re-query CCDS DB by Nucleotide ID:NM_020603Re-query CCDS DB by Protein ID:NP_065628Link to BLAST:NP_065628.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065628.1 622 Q9Z0H1 622 100% 0 0

Chromosomal Locations for CCDS 28637.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 33940738 33940806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33940885 33941091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33941192 33941272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33941406 33941518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33941633 33941720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33941822 33941883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33943346 33943450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33943558 33943708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33943801 33943936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33944482 33944581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33948220 33948533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33948643 33948737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33948836 33948931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33949073 33949186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 33949278 33949415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1869 nt):
ATGGAGACAGCCCCCAAGCCGGGTAGGGGTGTCCCACCCAAGAGAGACAAGCCTCAGGCCAAGAGGAAGA
AACCGCGGCGCTACTGGGAGGAGGAGACCACCCCGGCCGCCGTCGCCACCTCCCCGGGGCCGCCTCGGAA
GAAGGCGAGGACTGGGGAGTCGCGACCCCCGAGGTCCAAGAGCGCGCACATCGCCCAGAAGTCCCGGTTC
TCCAAGAAGCCCCCGATCTCAAAGACCGCTCCAGACTGGAAGAAGCCTCAGAGGACGCTGTCGGGGGCTC
AGGACCCGTTCCCAGGACCCGTCCCCGCCCCCCTGGAGGAGGCCCGGAAGTTTTGTCGAATTGACAAGTC
CAAAACGCTCCCACATTCGAAGCCTAAAACTCAAAGCAAACTCGAGAAGGCTGAAGCGCAAGAGGAAGAG
GCAAGCGTCAGAGCCGCCCGCGCTGAGCTGCTGCTTGCAGAGGAACCTGGGTTTCTGGTAGGAGAAGATG
GGGAAGACACGGCAAAAATCCTGCAGACAGACATCGTGGAGGCTGTGGACATCGCCAGTGCTGCCAAGCA
CTTTGACCTGAATCTAAGACAGTTCGGACCCTACAGACTGAATTACTCTCGAACAGGGAGACACCTGGCT
TTAGGAGGGCGTCGGGGTCACGTGGCTGCCCTCGACTGGGTGACCAAGAAGCTCATGTGTGAGATCAACG
TCATGGAAGCAGTACGGGACATCCACTTCCTCCATTCTGAGGCTCTGCTCGCAGTCGCTCAGAACCGCTG
GCTTTATATCTACGACAACCAAGGCATCGAGCTTCACTGCATCCGCCGCTGTGACCGAGTGACCCGGCTT
GAGTTCCTCCCCTTCCACTTCCTCCTGGCCACCACTTCAGAGACAGGGTTTCTGACCTACCTGGATGTGT
CAGTGGGGAAGATCGTGACAGCTCTGAACGTGCGGGCGGGACGGCTCAGTGTCATGGCTCAGAACCCCTA
CAATGCTGTTATCCACCTGGGACACAGTAATGGCACAGTGTCTTTATGGAGTCCAGCAGTGAAGGAGCCA
CTGGCGAAGATTCTGTGTCACCGTGGTGGGGTGCGTGCTGTGGCAGTAGATTCTACAGGCACGTACATGG
CCACCTCTGGTCTGGACCACCAGCTGAAGATCTTTGACTTGCGAGGGACATTCCAGCCCCTGAGTTCCCG
GACCTTGCCCCAGGGAGCAGGGCACTTGGCCTTTTCCCAGCGGGGACTGTTAGTTGCGGGAATGGGTGAT
GTGGTCAACATATGGGCAGGGCAGGGCAAGGCCAGCCCACCCTCCCTGGAGCAGCCCTACCTCACCCACC
GGCTCTCAGGCCACGTGCATGGGCTCCAGTTCTGCCCCTTTGAAGACGTGTTGGGGGTGGGGCACAGTGG
AGGCTTCACCAGCATGCTGGTCCCTGGGGCTGCGGAGCCTAACTTTGATGGTTTGGAGAATAACCCATAC
CGGAGCCGGAAGCAGCGCCAGGAATGGGAGGTGAAGGCCCTGCTGGAGAAGGTACCTGCAGAGCTCATTT
GTTTGAACCCCCGAGCCCTGGCAGAGGTGGATGTGGTCACTCTGGAGCAGCAGAAGAAGGAGCGGATAGA
GAGACTGGGCTATGATCCAGACGCCAAGGCTGCCTTTCAGCCCAAGGCCAAGCAGAAGGGCCGAAGCTCT
ACGGCGAGCCTAGTGAAGAGGAAGAAGAAGGTCATGGACCAGGAGCACAGGGACAAAGTCCGGCAGAGCC
TTGAGCAGCAGCAGCAGAAGAAAAAGCAGGATATGGCCATGCCTCCTGGAGCCCGTCCCTCTGCACTGGA
TAGATTTGTACGACGAGCCAGAGAAGGCGGTCTCCAAGTTGACCCTTAG

Translation (622 aa):
METAPKPGRGVPPKRDKPQAKRKKPRRYWEEETTPAAVATSPGPPRKKARTGESRPPRSKSAHIAQKSRF
SKKPPISKTAPDWKKPQRTLSGAQDPFPGPVPAPLEEARKFCRIDKSKTLPHSKPKTQSKLEKAEAQEEE
ASVRAARAELLLAEEPGFLVGEDGEDTAKILQTDIVEAVDIASAAKHFDLNLRQFGPYRLNYSRTGRHLA
LGGRRGHVAALDWVTKKLMCEINVMEAVRDIHFLHSEALLAVAQNRWLYIYDNQGIELHCIRRCDRVTRL
EFLPFHFLLATTSETGFLTYLDVSVGKIVTALNVRAGRLSVMAQNPYNAVIHLGHSNGTVSLWSPAVKEP
LAKILCHRGGVRAVAVDSTGTYMATSGLDHQLKIFDLRGTFQPLSSRTLPQGAGHLAFSQRGLLVAGMGD
VVNIWAGQGKASPPSLEQPYLTHRLSGHVHGLQFCPFEDVLGVGHSGGFTSMLVPGAAEPNFDGLENNPY
RSRKQRQEWEVKALLEKVPAELICLNPRALAEVDVVTLEQQKKERIERLGYDPDAKAAFQPKAKQKGRSS
TASLVKRKKKVMDQEHRDKVRQSLEQQQQKKKQDMAMPPGARPSALDRFVRRAREGGLQVDP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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