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Report for CCDS13443.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13443.1 Public Homo sapiens 20 ZNF217 24 110 108 CCDS HistoryNCBI Gene:7764Re-query CCDS DB by CCDS ID:13443.1Re-query CCDS DB by GeneID:7764See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13443.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302342.3 ENSP00000304308.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000302342.3Link to Ensembl Protein Viewer:ENSP00000304308.3Re-query CCDS DB by Nucleotide ID:ENST00000302342Re-query CCDS DB by Protein ID:ENSP00000304308
Original member Current member EBI ENST00000371471.7 ENSP00000360526.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371471.7Link to Ensembl Protein Viewer:ENSP00000360526.2Re-query CCDS DB by Nucleotide ID:ENST00000371471Re-query CCDS DB by Protein ID:ENSP00000360526
Original member Current member NCBI NM_006526.3 NP_006517.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006526.3Link to Protein Sequence:NP_006517.1Re-query CCDS DB by Nucleotide ID:NM_006526Re-query CCDS DB by Protein ID:NP_006517Link to BLAST:NP_006517.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006517.1 1048 O75362 1048 100% 0 0

Chromosomal Locations for CCDS 13443.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 53571744 53571853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 53575727 53577280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 53578334 53578450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 53581461 53582826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3147 nt):
ATGCAATCGAAAGTGACAGGAAACATGCCAACTCAATCCCTCTTAATGTACATGGATGGGCCAGAAGTGA
TTGGCAGCTCTCTTGGCAGTCCGATGGAGATGGAGGATGCCTTGTCAATGAAAGGGACCGCTGTTGTTCC
ATTCCGAGCTACACAAGAAAAAAATGTCATCCAAATCGAGGGGTATATGCCCTTGGATTGCATGTTCTGC
AGCCAGACCTTCACACATTCAGAAGACCTTAATAAACATGTCTTAATGCAACACCGGCCTACCCTCTGTG
AACCAGCAGTTCTTCGGGTTGAAGCAGAGTATCTCAGTCCGCTTGATAAAAGTCAAGTGCGAACAGAACC
TCCCAAGGAAAAGAATTGCAAGGAAAATGAATTTAGCTGTGAGGTATGTGGGCAGACATTTAGAGTCGCT
TTTGATGTTGAGATCCACATGAGAACACACAAAGATTCTTTCACTTACGGGTGTAACATGTGCGGAAGAA
GATTCAAGGAGCCTTGGTTTCTTAAAAATCACATGCGGACACATAATGGCAAATCGGGGGCCAGAAGCAA
ACTGCAGCAAGGCTTGGAGAGTAGTCCAGCAACGATCAACGAGGTCGTCCAGGTGCACGCGGCCGAGAGC
ATCTCCTCTCCTTACAAAATCTGCATGGTTTGTGGCTTCCTATTTCCAAATAAAGAAAGTCTAATTGAGC
ACCGCAAGGTGCACACCAAAAAAACTGCTTTCGGTACCAGCAGCGCGCAGACAGACTCTCCACAAGGAGG
AATGCCGTCCTCGAGGGAGGACTTCCTGCAGTTGTTCAACTTGAGACCAAAATCTCACCCTGAAACGGGG
AAGAAGCCTGTCAGATGCATCCCTCAGCTCGATCCGTTCACCACCTTCCAGGCTTGGCAGCTGGCTACCA
AAGGAAAAGTTGCCATTTGCCAAGAAGTGAAGGAATCGGGGCAAGAAGGGAGCACCGACAACGACGATTC
GAGTTCCGAGAAGGAGCTTGGAGAAACAAATAAGGGCAGTTGTGCAGGCCTCTCGCAAGAGAAAGAGAAG
TGCAAACACTCCCACGGCGAAGCGCCCTCCGTGGACGCGGATCCCAAGTTACCCAGTAGCAAGGAGAAGC
CCACTCACTGCTCCGAGTGCGGCAAAGCTTTCAGAACCTACCACCAGCTGGTCTTGCACTCCAGGGTCCA
CAAGAAGGACCGGAGGGCCGGCGCGGAGTCGCCCACCATGTCTGTGGACGGGAGGCAGCCGGGGACGTGT
TCTCCTGACCTCGCCGCCCCTCTGGATGAAAATGGAGCCGTGGATCGAGGGGAAGGTGGTTCTGAAGACG
GATCTGAGGATGGGCTTCCCGAAGGAATCCATCTGGATAAAAATGATGATGGAGGAAAAATAAAACATCT
TACATCTTCAAGAGAGTGTAGTTATTGTGGAAAGTTTTTCCGTTCAAATTATTACCTCAATATTCATCTC
AGAACGCATACAGGTGAAAAACCATACAAATGTGAATTTTGTGAATATGCTGCAGCCCAGAAGACATCTC
TGAGGTATCACTTGGAGAGACATCACAAGGAAAAACAAACCGATGTTGCTGCTGAAGTCAAGAACGATGG
TAAAAATCAGGACACTGAAGATGCACTATTAACCGCTGACAGTGCGCAAACCAAAAATTTGAAAAGATTT
TTTGATGGTGCCAAAGATGTTACAGGCAGTCCACCTGCAAAGCAGCTTAAGGAGATGCCTTCTGTTTTTC
AGAATGTTCTGGGCAGCGCTGTCCTCTCACCAGCACACAAAGATACTCAGGATTTCCATAAAAATGCAGC
TGATGACAGTGCTGATAAAGTGAATAAAAACCCTACCCCTGCTTACCTGGACCTGTTAAAAAAGAGATCA
GCAGTTGAAACTCAGGCAAATAACCTCATCTGTAGAACCAAGGCGGATGTTACTCCTCCTCCGGATGGCA
GTACCACCCATAACCTTGAAGTTAGCCCCAAAGAGAAGCAAACGGAGACCGCAGCTGACTGCAGATACAG
GCCAAGTGTGGATTGTCACGAAAAACCTTTAAATTTATCCGTGGGGGCTCTTCACAATTGCCCGGCAATT
TCTTTGAGTAAAAGTTTGATTCCAAGTATCACCTGTCCATTTTGTACCTTCAAGACATTTTATCCAGAAG
TTTTAATGATGCACCAGAGACTGGAGCATAAATACAATCCTGACGTTCATAAAAACTGTCGAAACAAGTC
CTTGCTTAGAAGTCGACGTACCGGATGCCCGCCAGCGTTGCTGGGAAAAGATGTGCCTCCCCTCTCTAGT
TTCTGTAAACCCAAGCCCAAGTCTGCTTTCCCGGCGCAGTCCAAATCCCTGCCATCTGCGAAGGGGAAGC
AGAGCCCTCCTGGGCCAGGCAAGGCCCCTCTGACTTCAGGGATAGACTCTAGCACTTTAGCCCCAAGTAA
CCTGAAGTCCCACAGACCACAGCAGAATGTGGGGGTCCAAGGGGCCGCCACCAGGCAACAGCAATCTGAG
ATGTTTCCTAAAACCAGTGTTTCCCCTGCACCGGATAAGACAAAAAGACCCGAGACAAAATTGAAACCTC
TTCCAGTAGCTCCTTCTCAGCCCACCCTCGGCAGCAGTAACATCAATGGTTCCATCGACTACCCCGCCAA
GAACGACAGCCCGTGGGCACCTCCGGGAAGAGACTATTTCTGTAATCGGAGTGCCAGCAATACTGCAGCA
GAATTTGGTGAGCCCCTTCCAAAAAGACTGAAGTCCAGCGTGGTTGCCCTTGACGTTGACCAGCCCGGGG
CCAATTACAGAAGAGGCTATGACCTTCCCAAGTACCATATGGTCAGAGGCATCACATCACTGTTACCGCA
GGACTGTGTGTATCCGTCGCAGGCGCTGCCTCCCAAACCAAGGTTCCTGAGCTCCAGCGAGGTCGATTCT
CCAAATGTGCTGACTGTTCAGAAGCCCTATGGTGGCTCCGGGCCACTTTACACTTGTGTGCCTGCTGGTA
GTCCAGCATCCAGCTCGACGTTAGAAGGAAAAAGGCCTGTGTCATATCAACACTTATCTAACAGCATGGC
ACAAAAGAGAAACTATGAGAATTTTATTGGGAATGCACATTATCGACCAAATGACAAAAAAACTTGA

Translation (1048 aa):
MQSKVTGNMPTQSLLMYMDGPEVIGSSLGSPMEMEDALSMKGTAVVPFRATQEKNVIQIEGYMPLDCMFC
SQTFTHSEDLNKHVLMQHRPTLCEPAVLRVEAEYLSPLDKSQVRTEPPKEKNCKENEFSCEVCGQTFRVA
FDVEIHMRTHKDSFTYGCNMCGRRFKEPWFLKNHMRTHNGKSGARSKLQQGLESSPATINEVVQVHAAES
ISSPYKICMVCGFLFPNKESLIEHRKVHTKKTAFGTSSAQTDSPQGGMPSSREDFLQLFNLRPKSHPETG
KKPVRCIPQLDPFTTFQAWQLATKGKVAICQEVKESGQEGSTDNDDSSSEKELGETNKGSCAGLSQEKEK
CKHSHGEAPSVDADPKLPSSKEKPTHCSECGKAFRTYHQLVLHSRVHKKDRRAGAESPTMSVDGRQPGTC
SPDLAAPLDENGAVDRGEGGSEDGSEDGLPEGIHLDKNDDGGKIKHLTSSRECSYCGKFFRSNYYLNIHL
RTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHKEKQTDVAAEVKNDGKNQDTEDALLTADSAQTKNLKRF
FDGAKDVTGSPPAKQLKEMPSVFQNVLGSAVLSPAHKDTQDFHKNAADDSADKVNKNPTPAYLDLLKKRS
AVETQANNLICRTKADVTPPPDGSTTHNLEVSPKEKQTETAADCRYRPSVDCHEKPLNLSVGALHNCPAI
SLSKSLIPSITCPFCTFKTFYPEVLMMHQRLEHKYNPDVHKNCRNKSLLRSRRTGCPPALLGKDVPPLSS
FCKPKPKSAFPAQSKSLPSAKGKQSPPGPGKAPLTSGIDSSTLAPSNLKSHRPQQNVGVQGAATRQQQSE
MFPKTSVSPAPDKTKRPETKLKPLPVAPSQPTLGSSNINGSIDYPAKNDSPWAPPGRDYFCNRSASNTAA
EFGEPLPKRLKSSVVALDVDQPGANYRRGYDLPKYHMVRGITSLLPQDCVYPSQALPPKPRFLSSSEVDS
PNVLTVQKPYGGSGPLYTCVPAGSPASSSTLEGKRPVSYQHLSNSMAQKRNYENFIGNAHYRPNDKKT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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