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Report for CCDS40325.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40325.1 Public Mus musculus 8 Adam20 23 108 98 CCDS HistoryNCBI Gene:384806Re-query CCDS DB by CCDS ID:40325.1Re-query CCDS DB by GeneID:384806See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40325.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056331.7 ENSMUSP00000057794.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056331.7Link to Ensembl Protein Viewer:ENSMUSP00000057794.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000056331Re-query CCDS DB by Protein ID:ENSMUSP00000057794
Original member Current member NCBI NM_001009548.2 NP_001009548.1 Accepted alive Link to Nucleotide Sequence:NM_001009548.2Link to Protein Sequence:NP_001009548.1Re-query CCDS DB by Nucleotide ID:NM_001009548Re-query CCDS DB by Protein ID:NP_001009548Link to BLAST:NP_001009548.1

Chromosomal Locations for CCDS 40325.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 40794855 40797137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2283 nt):
ATGCAGACAACACAAAGGGCATCCTCCTTTGCTGCCGCAGAGGACAACATAGCTATGGATAAGGCTGTGG
TATACACAAGGATACCTCATCTGTACGTCTGGCTAGAGATATTGAATATTCTTTCATCACGGCCCTTGAC
TGGGTATGCTCAGCACACCAGCCTCCCAGAAGTAGTGATACCCTTACGGGTCACAGGCAACAGACCAATG
TGGGCTATGGGATGGCTGACCTATAGCCTGCATTTTGGGGGCCAGAAACATTTTATTCACATAAAGGCCA
AGAAGTTCTTGGTTTCTAGACTCTTCTCTGTATTCACCTACACTAAGCAAGGTGCTCTGCACAAGGACCA
GCCTTATGTCCAGAATGATTGCTACTACCATGGCCATATGGATGGAGACCCAGAGTCTATGGTTGCTATT
ACCACCTGTTATGGAGGCTTTCAAGGAATATTACAGATAAATGGCACAGTCTATGAAATCAAACCCAAGA
ACCTTTCTTCCACATTTGAACATTTGGTTCACAAGATGGACAGTGAGGAGACAGAATTACTCCCCATGAG
ATGTGCATTGACAGAAGAGATAGCAAAGCAAATGAAACGTCAGCAGAATGAGAACCCCACTCTGATGCAA
AACCACTATGAGGAATGGTGGACCCACAGGAGTTTTCTTGACCTGGCATTGGTTGTTGACTGTGAGCGAA
TTCGTTATCATAACAATAACAAATCACACGTGTTAGTGGAAGTATTCTTGATTATCAGTTTAATAAATAA
GATTTATTTTGCACTGGATATTGAGGTAGTTTTAATTGGACTTGAGTTGTGGAATGAAGGAAATCTTGTG
CCCGTGGATAGAATGCAAATTCTTCTAGAGGAATTTTGTGTTTGGAAGACTCTCAGCCTTAATATTCGAA
TTCCAAATGACATTGCACATCTTTTTGTGAATCATTCATTTGGTAAATTCCTTGGTTTAGCCTATGTTGG
TACTGTCTGTCTGCCATCTCATAATTGTGGAGTTGATCGTCTGTTAGGTCCTAATCTTTTTCAATTTGCA
CATATTATAGCACATGAGATTGGTCATAATCTGGGTATGGAGCATGATAGCAGCTCATGTACATGTGGAG
GAATAAATTATTGCTTAATGTCTTCAACGTACAGTTTCAACCCCGAGTTCAGTAACTGTAGTTATTCTAA
CTTCTGGACAACATATGCTACTACCAATTGTTTGCGCAAGGAAAAGATGTCAATAGGCAACCTACAAATC
CAGTTCTGTGGGAATGGAGTTGTTGACGATGGAGAACAGTGTGATTGTGGAGACAGGCATATGTGTGAAA
GAGATCAATGTTGTAACTCCAGGTGTGCCCTTAATGATGGCGCTGCCTGTGCTTTTGGGCTTTGCTGCTT
ATATTGCCAGATCATGCCAGCAGGCACAGTTTGCCGAGAAGAGGTCAATGAATGTGATCTTCCAGAATGG
TGCAACGGACATTCACATAAGTGTCCTAATGACGTTTATTTGCTTGATGGGAGTCCCTGTAGAGATGGTG
GCTACTGCTATGAGAAGAGATGTAATAACCGAGATGAACAATGTAAGCAAATCTTCGGCAAAGAAGCCAG
GAGTGCAGATCACAGTTGCTACAGAGAACTCAACACCCAAGGTGACCGTTTTGGCAACTGTGGTATGATC
AGAGATGCATACTTAAGATGTCATGACTCAGACATCCTCTGTGGCAGAGTTCAATGTGAGAACGTAACAC
GCATTCCATTTTTGAGGGACCATTCCACTGTACACTGGACTCACCTCAATGGTGTCACCTGTTGGGGGAC
TGACTACCATTTTGGGATGACAATCCCTGACATTGGTATTGTGAAAGATGGCACAGACTGTGGTCCAGAG
CATGTGTGTATTAATAAGAAGTGTGTTAGTAAGCCAATTTGGCTAGAACAGTGTTCATCCAAGACATGTA
CTATGAAAGGTGTGTGCAACAATTTACATCACTGCCACTGCAACCGGGGGTGGGACCCACCACATTGCCT
GGAAAGTGGCTTTGGAGGGAGTGTTGACAGTGGCCCTCCACCTGGAGAAGAGGAATCCCAGCAACATATG
GACCTGGTACTGATTACTCCAATTCTTTCCATTGTTTCCTTAGTCTTTCTGTTACCTTGGCTTTTGAATA
GGTATATAAGAACATCATCAAAGTTTGAGGAACCCACTGTTTCCACTTCCAAGGAGGAAGAAGAGAGCCA
TGTGGCAAGTAATGAGTCAGAAGCGCAACAGGTTGAAACATGA

Translation (760 aa):
MQTTQRASSFAAAEDNIAMDKAVVYTRIPHLYVWLEILNILSSRPLTGYAQHTSLPEVVIPLRVTGNRPM
WAMGWLTYSLHFGGQKHFIHIKAKKFLVSRLFSVFTYTKQGALHKDQPYVQNDCYYHGHMDGDPESMVAI
TTCYGGFQGILQINGTVYEIKPKNLSSTFEHLVHKMDSEETELLPMRCALTEEIAKQMKRQQNENPTLMQ
NHYEEWWTHRSFLDLALVVDCERIRYHNNNKSHVLVEVFLIISLINKIYFALDIEVVLIGLELWNEGNLV
PVDRMQILLEEFCVWKTLSLNIRIPNDIAHLFVNHSFGKFLGLAYVGTVCLPSHNCGVDRLLGPNLFQFA
HIIAHEIGHNLGMEHDSSSCTCGGINYCLMSSTYSFNPEFSNCSYSNFWTTYATTNCLRKEKMSIGNLQI
QFCGNGVVDDGEQCDCGDRHMCERDQCCNSRCALNDGAACAFGLCCLYCQIMPAGTVCREEVNECDLPEW
CNGHSHKCPNDVYLLDGSPCRDGGYCYEKRCNNRDEQCKQIFGKEARSADHSCYRELNTQGDRFGNCGMI
RDAYLRCHDSDILCGRVQCENVTRIPFLRDHSTVHWTHLNGVTCWGTDYHFGMTIPDIGIVKDGTDCGPE
HVCINKKCVSKPIWLEQCSSKTCTMKGVCNNLHHCHCNRGWDPPHCLESGFGGSVDSGPPPGEEESQQHM
DLVLITPILSIVSLVFLLPWLLNRYIRTSSKFEEPTVSTSKEEEESHVASNESEAQQVET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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