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Report for CCDS75299.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75299.1 Public Homo sapiens 5 GDF9 24 110 108 CCDS HistoryNCBI Gene:2661Re-query CCDS DB by CCDS ID:75299.1Re-query CCDS DB by GeneID:2661See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75299.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296875.4 ENSP00000296875.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000296875.4Link to Ensembl Protein Viewer:ENSP00000296875.3Re-query CCDS DB by Nucleotide ID:ENST00000296875Re-query CCDS DB by Protein ID:ENSP00000296875
Original member Current member EBI ENST00000621295.5 ENSP00000484339.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000621295.5Link to Ensembl Protein Viewer:ENSP00000484339.1Re-query CCDS DB by Nucleotide ID:ENST00000621295Re-query CCDS DB by Protein ID:ENSP00000484339
Original member Current member EBI ENST00000624492.4 ENSP00000485037.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000624492.4Link to Ensembl Protein Viewer:ENSP00000485037.1Re-query CCDS DB by Nucleotide ID:ENST00000624492Re-query CCDS DB by Protein ID:ENSP00000485037
Original member Current member EBI ENST00000624495.4 ENSP00000485231.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000624495.4Link to Ensembl Protein Viewer:ENSP00000485231.1Re-query CCDS DB by Nucleotide ID:ENST00000624495Re-query CCDS DB by Protein ID:ENSP00000485231
Original member Current member NCBI NM_001288824.4 NP_001275753.1 Accepted alive Link to Nucleotide Sequence:NM_001288824.4Link to Protein Sequence:NP_001275753.1Re-query CCDS DB by Nucleotide ID:NM_001288824Re-query CCDS DB by Protein ID:NP_001275753Link to BLAST:NP_001275753.1
Original member Current member NCBI NM_001288825.4 NP_001275754.1 Accepted alive Link to Nucleotide Sequence:NM_001288825.4Link to Protein Sequence:NP_001275754.1Re-query CCDS DB by Nucleotide ID:NM_001288825Re-query CCDS DB by Protein ID:NP_001275754Link to BLAST:NP_001275754.1
Original member Current member NCBI NM_001288826.3 NP_001275755.1 Accepted alive Link to Nucleotide Sequence:NM_001288826.3Link to Protein Sequence:NP_001275755.1Re-query CCDS DB by Nucleotide ID:NM_001288826Re-query CCDS DB by Protein ID:NP_001275755Link to BLAST:NP_001275755.1
Original member Current member NCBI NM_001288827.3 NP_001275756.1 Accepted alive Link to Nucleotide Sequence:NM_001288827.3Link to Protein Sequence:NP_001275756.1Re-query CCDS DB by Nucleotide ID:NM_001288827Re-query CCDS DB by Protein ID:NP_001275756Link to BLAST:NP_001275756.1
Original member Current member NCBI NM_001288828.3 NP_001275757.1 Accepted alive Link to Nucleotide Sequence:NM_001288828.3Link to Protein Sequence:NP_001275757.1Re-query CCDS DB by Nucleotide ID:NM_001288828Re-query CCDS DB by Protein ID:NP_001275757Link to BLAST:NP_001275757.1

Chromosomal Locations for CCDS 75299.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 132861589 132862556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 132864137 132864269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1101 nt):
ATGAAGAAGCTCTATAAGACATATGCTACCAAGGAAGGGATTCCTAAATCCAATAGAAGTCACCTCTACA
ACACTGTTCGGCTCTTCACCCCCTGTACCCGGCACAAGCAGGCTCCTGGAGACCAGGTAACAGGAATCCT
TCCATCAGTGGAACTGCTATTTAACCTGGATCGCATTACTACCGTTGAACACTTACTCAAGTCAGTCTTG
CTGTACAATATCAACAACTCAGTTTCTTTTTCCTCTGCTGTCAAATGTGTGTGCAATCTAATGATAAAGG
AGCCAAAGTCTTCTAGCAGGACTCTCGGCAGAGCTCCATACTCATTTACCTTTAACTCACAGTTTGAATT
TGGAAAGAAACACAAATGGATTCAGATTGATGTGACCAGCCTCCTTCAACCTTTAGTGGCCTCCAACAAG
AGAAGTATTCACATGTCTATAAATTTTACTTGCATGAAAGACCAGCTGGAGCATCCTTCAGCACAGAATG
GTTTGTTTAACATGACTCTGGTGTCCCCCTCACTGATCTTATATTTGAATGACACAAGTGCTCAGGCTTA
TCACAGCTGGTATTCCCTTCACTATAAAAGGAGGCCTTCCCAGGGTCCTGACCAGGAGAGAAGTCTGTCT
GCCTATCCTGTGGGAGAAGAGGCTGCTGAGGATGGGAGATCTTCCCATCACCGTCACCGCAGAGGTCAGG
AAACTGTCAGTTCTGAATTGAAGAAGCCCTTGGGCCCAGCTTCCTTCAATCTGAGTGAATACTTCAGACA
ATTTCTTCTTCCCCAAAATGAGTGTGAGCTCCATGACTTTAGACTTAGCTTTAGTCAGCTGAAGTGGGAC
AACTGGATTGTGGCTCCGCACAGGTACAACCCTCGATACTGTAAAGGGGACTGTCCAAGGGCAGTTGGAC
ATCGGTATGGCTCTCCAGTTCACACCATGGTACAGAACATCATCTATGAGAAGCTGGACTCCTCAGTGCC
AAGACCGTCATGTGTACCTGCCAAATACAGCCCCTTGAGTGTTTTGACCATTGAGCCCGATGGCTCAATT
GCCTATAAAGAGTACGAAGATATGATAGCTACAAAGTGCACCTGTCGTTAA

Translation (366 aa):
MKKLYKTYATKEGIPKSNRSHLYNTVRLFTPCTRHKQAPGDQVTGILPSVELLFNLDRITTVEHLLKSVL
LYNINNSVSFSSAVKCVCNLMIKEPKSSSRTLGRAPYSFTFNSQFEFGKKHKWIQIDVTSLLQPLVASNK
RSIHMSINFTCMKDQLEHPSAQNGLFNMTLVSPSLILYLNDTSAQAYHSWYSLHYKRRPSQGPDQERSLS
AYPVGEEAAEDGRSSHHRHRRGQETVSSELKKPLGPASFNLSEYFRQFLLPQNECELHDFRLSFSQLKWD
NWIVAPHRYNPRYCKGDCPRAVGHRYGSPVHTMVQNIIYEKLDSSVPRPSCVPAKYSPLSVLTIEPDGSI
AYKEYEDMIATKCTCR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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