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Report for CCDS21738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21738.1 Public Mus musculus 7 Tmem9b 23 108 98 CCDS HistoryNCBI Gene:56786Re-query CCDS DB by CCDS ID:21738.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21738.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033333.12 ENSMUSP00000033333.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033333.12Link to Ensembl Protein Viewer:ENSMUSP00000033333.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000033333Re-query CCDS DB by Protein ID:ENSMUSP00000033333
Original member Current member NCBI NM_020050.1 NP_064434.1 Accepted alive Link to Nucleotide Sequence:NM_020050.1Link to Protein Sequence:NP_064434.1Re-query CCDS DB by Nucleotide ID:NM_020050Re-query CCDS DB by Protein ID:NP_064434Link to BLAST:NP_064434.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064434.1 199 Q9JJR8 199 100% 0 0

Chromosomal Locations for CCDS 21738.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 109736836 109736991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109743547 109743681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109745310 109745418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109750013 109750104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109752071 109752178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (600 nt):
ATGGCGAGCCTATGGTGCGGAAACCTGCTGCGGCTGGGCTCGGGGCTCAGCATGTCCTGCCTGGCGCTGT
CGGTGCTGCTGCTCGCGCAGCTGACAGGCGCCGCCAAGAATTTTGAAGATGTGAGATGTAAATGCATCTG
CCCTCCCTATAAAGAGAATCCTGGGCACATTTATAATAAGAATATATCTCAGAAAGATTGTGATTGCCTT
CATGTCGTGGAGCCCATGCCTGTACGGGGACCTGATGTAGAAGCATACTGTCTACGCTGTGAATGCAAAT
ACGAAGAGAGAAGCTCTGTCACAATCAAGGTTACCATTATAATTTATCTCTCTATTTTGGGCCTTCTGCT
TCTGTACATGGTATATCTTACCTTAGTTGAGCCCATCCTGAAGAGGCGCCTCTTTGGACACTCCCAGCTG
TTGCAGAGCGATGATGACGTTGGGGATCACCAGCCTTTTGCAAATGCCCATGATGTGCTGGCCCGCTCTC
GCAGCCGAGCCAATGTTCTAAACAAGGTGGAGTACGCTCAGCAGCGCTGGAAGCTCCAGGTCCAGGAGCA
GCGAAAGTCTGTCTTCGACCGACACGTTGTCCTCAGCTAA

Translation (199 aa):
MASLWCGNLLRLGSGLSMSCLALSVLLLAQLTGAAKNFEDVRCKCICPPYKENPGHIYNKNISQKDCDCL
HVVEPMPVRGPDVEAYCLRCECKYEERSSVTIKVTIIIYLSILGLLLLYMVYLTLVEPILKRRLFGHSQL
LQSDDDVGDHQPFANAHDVLARSRSRANVLNKVEYAQQRWKLQVQEQRKSVFDRHVVLS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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