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Report for CCDS7795.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7795.1 Public Homo sapiens 11 ASCL3 24 110 108 CCDS HistoryNCBI Gene:56676Re-query CCDS DB by CCDS ID:7795.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7795.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000531618.2 ENSP00000435770.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000531618.2Link to Ensembl Protein Viewer:ENSP00000435770.1Re-query CCDS DB by Nucleotide ID:ENST00000531618Re-query CCDS DB by Protein ID:ENSP00000435770
Original member Current member NCBI NM_020646.3 NP_065697.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020646.3Link to Protein Sequence:NP_065697.1Re-query CCDS DB by Nucleotide ID:NM_020646Re-query CCDS DB by Protein ID:NP_065697Link to BLAST:NP_065697.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065697.1 181 Q9NQ33 181 100% 0 0

Chromosomal Locations for CCDS 7795.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 8937616 8938161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (546 nt):
ATGATGGACAACAGAGGCAACTCTAGTCTACCTGACAAACTTCCTATCTTCCCTGATTCTGCCCGCTTGC
CACTGACCAGGTCCTTCTATCTGGAGCCCATGGTCACTTTCCACGTGCACCCAGAGGCCCCGGTGTCATC
CCCTTACTCTGAGGAGCTGCCACGGCTGCCTTTTCCCAGCGACTCTCTTATCCTGGGAAATTACAGTGAA
CCCTGCCCCTTCTCTTTCCCGATGCCTTATCCAAATTACAGAGGGTGCGAGTACTCCTACGGGCCAGCCT
TCACCCGGAAAAGGAATGAGCGGGAAAGGCAGCGGGTGAAATGTGTCAATGAAGGCTACGCCCAGCTCCG
CCATCATCTGCCAGAGGAGTATTTGGAGAAGCGACTCAGCAAAGTGGAAACCCTCAGAGCTGCGATCAAG
TACATTAACTACCTGCAGTCTCTTCTGTACCCTGATAAAGCTGAGACCAAGAATAACCCTGGAAAAGTTT
CCTCCATGATAGCAACCACCAGCCACCATGCTGACCCTATGTTCAGAATTGTTTGA

Translation (181 aa):
MMDNRGNSSLPDKLPIFPDSARLPLTRSFYLEPMVTFHVHPEAPVSSPYSEELPRLPFPSDSLILGNYSE
PCPFSFPMPYPNYRGCEYSYGPAFTRKRNERERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIK
YINYLQSLLYPDKAETKNNPGKVSSMIATTSHHADPMFRIV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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