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Report for CCDS49676.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49676.1 Public Mus musculus 15 Rbx1 23 108 98 CCDS HistoryNCBI Gene:56438Re-query CCDS DB by CCDS ID:49676.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49676.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023036.6 ENSMUSP00000023036.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023036.6Link to Ensembl Protein Viewer:ENSMUSP00000023036.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000023036Re-query CCDS DB by Protein ID:ENSMUSP00000023036
Original member Current member NCBI NM_019712.3 NP_062686.1 Accepted alive Link to Nucleotide Sequence:NM_019712.3Link to Protein Sequence:NP_062686.1Re-query CCDS DB by Nucleotide ID:NM_019712Re-query CCDS DB by Protein ID:NP_062686Link to BLAST:NP_062686.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062686.1 108 P62878 108 100% 0 0

Chromosomal Locations for CCDS 49676.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 81466373 81466450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81468155 81468233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81470952 81471022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81473843 81473928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81475086 81475098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (327 nt):
ATGGCGGCGGCGATGGATGTGGATACCCCCAGCGGCACCAACAGCGGCGCGGGCAAGAAGCGCTTTGAAG
TTAAAAAGTGGAATGCAGTGGCCCTCTGGGCCTGGGACATTGTGGTTGATAACTGTGCCATCTGCAGGAA
CCACATTATGGATCTTTGTATCGAATGTCAGGCCAACCAGGCGTCAGCTACTTCCGAAGAGTGTACGGTT
GCATGGGGAGTCTGCAACCATGCTTTTCATTTCCACTGCATCTCTCGATGGCTCAAAACGAGGCAGGTGT
GTCCGTTGGACAACAGAGAGTGGGAGTTCCAGAAGTATGGGCATTAG

Translation (108 aa):
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTV
AWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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