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Report for CCDS35462.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35462.1 Public Homo sapiens X F8A2 24 110 108 CCDS HistoryNCBI Gene:474383Re-query CCDS DB by CCDS ID:35462.1Re-query CCDS DB by GeneID:474383See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35462.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369505.5 ENSP00000358518.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369505.5Link to Ensembl Protein Viewer:ENSP00000358518.3Re-query CCDS DB by Nucleotide ID:ENST00000369505Re-query CCDS DB by Protein ID:ENSP00000358518
Original member Current member NCBI NM_001007523.2 NP_001007524.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001007523.2Link to Protein Sequence:NP_001007524.1Re-query CCDS DB by Nucleotide ID:NM_001007523Re-query CCDS DB by Protein ID:NP_001007524Link to BLAST:NP_001007524.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007524.1 371 P23610 371 100% 0 0

Chromosomal Locations for CCDS 35462.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 155382115 155383230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1116 nt):
ATGGCGGCAGCGGCTGCAGGCCTGGGCGGCGGCGGCGCCGGCCCGGGACCCGAGGCCGGGGACTTCCTGG
CCCGCTACCGGCTGGTATCGAACAAGCTGAAGAAGCGGTTCCTGCGGAAGCCGAACGTGGCGGAGGCCGG
CGAGCAGTTCGGACAGCTGGGCCGGGAGCTGCGCGCCCAGGAGTGTCTGCCCTACGCGGCCTGGTGCCAG
CTGGCGGTGGCGCGCTGCCAGCAGGCGCTCTTCCACGGGCCCGGGGAGGCGCTGGCCCTCACCGAGGCCG
CCCGCCTCTTCCTGCGGCAGGAGCGCGACGCGCGCCAGCGCCTGGTCTGCCCCGCCGCCTACGGGGAGCC
GCTGCAGGCCGCCGCCAGCGCCCTGGGCGCCGCGGTGCGTCTGCACCTCGAGCTGGGCCAGCCGGCCGCC
GCCGCCGCCCTCTGCCTCGAGCTGGCCGCCGCCCTGCGCGACCTGGGCCAGCCGGCCGCCGCCGCCGGTC
ACTTCCAGCGCGCCGCCCAGCTCCAGCTGCCCCAGCTGCCCCTGGCCGCGCTGCAGGCGCTTGGCGAGGC
CGCCTCCTGCCAGCTGCTGGCGCGCGACTACACCGGCGCCCTGGCGGTCTTCACGCGCATGCAGCGCCTG
GCGCGGGAGCACGGCAGCCACCCGGTGCAGTCACTGCCGCCGCCCCCGCCGCCGGCACCCCAGCCCGGGC
CCGGGGCGACGCCCGCCCTACCGGCCGCGCTGCTTCCTCCGAACTCCGGCTCGGCGGCGCCCTCTCCCGC
CGCCCTGGGCGCCTTCTCGGACGTGCTGGTCCGCTGCGAGGTGTCCCGCGTGCTGCTGCTGCTCCTCCTG
CAACCACCGCCCGCCAAGCTGCTGCCGGAGCACGCCCAGACCCTGGAGAAGTACTCCTGGGAGGCTTTTG
ACAGCCACGGGCAGGAGAGCAGCGGCCAGCTTCCCGAGGAGCTCTTTCTGCTGCTCCAGTCTTTGGTCAT
GGCTACCCACGAAAAGGACACGGAAGCCATCAAGTCGCTGCAGGTGGAGATGTGGCCACTGTTGACTGCT
GAGCAGAACCACCTCCTTCACCTCGTTCTGCAAGAAACCATCTCCCCCTCAGGACAGGGAGTCTGA

Translation (371 aa):
MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQECLPYAAWCQ
LAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQAAASALGAAVRLHLELGQPAA
AAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAALQALGEAASCQLLARDYTGALAVFTRMQRL
AREHGSHPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLL
QPPPAKLLPEHAQTLEKYSWEAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTA
EQNHLLHLVLQETISPSGQGV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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